RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 DDX19BQ9UMR2 479 aa15.31■□□□□ 0.04
TPM3-202ENST00000302206 GLI3P10071 1580 aa15.3■□□□□ 0.04
TPM3-202ENST00000302206 ZC3H6P61129 1189 aaKnown RBP15.3■□□□□ 0.04
TPM3-202ENST00000302206 AKAP4Q5JQC9 854 aa15.3■□□□□ 0.04
TPM3-202ENST00000302206 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
TPM3-202ENST00000302206 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
TPM3-202ENST00000302206 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
TPM3-202ENST00000302206 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
TPM3-202ENST00000302206 TAF7Q15545 349 aaPredicted RBP15.29■□□□□ 0.04
TPM3-202ENST00000302206 UNC5CLQ8IV45 518 aa15.29■□□□□ 0.04
TPM3-202ENST00000302206 API5Q9BZZ5 524 aaKnown RBP15.29■□□□□ 0.04
TPM3-202ENST00000302206 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
TPM3-202ENST00000302206 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
TPM3-202ENST00000302206 PLEKHG5O94827 1062 aa15.27■□□□□ 0.04
TPM3-202ENST00000302206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.045e-7■■■□□ 18.1
TPM3-202ENST00000302206 ABCC4O15439 1325 aa15.26■□□□□ 0.03
TPM3-202ENST00000302206 PSDA5PKW4 1024 aaPredicted RBP15.26■□□□□ 0.03
TPM3-202ENST00000302206 ELL2O00472 640 aaPredicted RBP15.26■□□□□ 0.03
TPM3-202ENST00000302206 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
TPM3-202ENST00000302206 TMEM57Q8N5G2 664 aa15.26■□□□□ 0.03
TPM3-202ENST00000302206 SLIT2O94813 1529 aa15.26■□□□□ 0.03
TPM3-202ENST00000302206 PTPRCP08575 1304 aa15.25■□□□□ 0.03
TPM3-202ENST00000302206 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
TPM3-202ENST00000302206 CABLES1Q8TDN4 633 aa15.25■□□□□ 0.03
TPM3-202ENST00000302206 CHMP4AQ9BY43 222 aa15.25■□□□□ 0.03
TPM3-202ENST00000302206 KDM3BQ7LBC6 1761 aa15.25■□□□□ 0.03
TPM3-202ENST00000302206 BAG6P46379 1132 aa15.24■□□□□ 0.03
TPM3-202ENST00000302206 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
TPM3-202ENST00000302206 SEPT12Q8IYM1 358 aa15.24■□□□□ 0.03
TPM3-202ENST00000302206 RAPGEF4Q8WZA2 1011 aa15.24■□□□□ 0.03
TPM3-202ENST00000302206 RWDD1Q9H446 243 aaPredicted RBP15.24■□□□□ 0.03
TPM3-202ENST00000302206 ZBTB40Q9NUA8 1239 aa15.24■□□□□ 0.03
TPM3-202ENST00000302206 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
TPM3-202ENST00000302206 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
TPM3-202ENST00000302206 HOXB7P09629 217 aa15.23■□□□□ 0.03
TPM3-202ENST00000302206 TATP17735 454 aaPredicted RBP15.23■□□□□ 0.03
TPM3-202ENST00000302206 NLRP2Q9NX02 1062 aa15.23■□□□□ 0.03
TPM3-202ENST00000302206 MIS18AQ9NYP9 233 aa15.23■□□□□ 0.03
TPM3-202ENST00000302206 RNMTO43148 476 aaKnown RBP15.22■□□□□ 0.03
TPM3-202ENST00000302206 IGHDP01880 384 aa15.22■□□□□ 0.03
TPM3-202ENST00000302206 HDAC1Q13547 482 aaPredicted RBP15.22■□□□□ 0.03
TPM3-202ENST00000302206 KRT24Q2M2I5 525 aa15.22■□□□□ 0.03
TPM3-202ENST00000302206 SPG7Q9UQ90 795 aa15.22■□□□□ 0.03
TPM3-202ENST00000302206 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
TPM3-202ENST00000302206 CACNA1FO60840 1977 aa15.22■□□□□ 0.03
TPM3-202ENST00000302206 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.03
TPM3-202ENST00000302206 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
TPM3-202ENST00000302206 CCDC30Q5VVM6 783 aa15.21■□□□□ 0.03
TPM3-202ENST00000302206 INTS3Q68E01 1043 aaKnown RBP15.21■□□□□ 0.03
TPM3-202ENST00000302206 KRT27Q7Z3Y8 459 aa15.21■□□□□ 0.03
TPM3-202ENST00000302206 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.03
TPM3-202ENST00000302206 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
TPM3-202ENST00000302206 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
TPM3-202ENST00000302206 WDR17Q8IZU2 1322 aa15.2■□□□□ 0.02
TPM3-202ENST00000302206 TEFQ10587 303 aa15.2■□□□□ 0.02
TPM3-202ENST00000302206 CHRNA2Q15822 529 aa15.2■□□□□ 0.02
TPM3-202ENST00000302206 LGR6Q9HBX8 967 aa15.2■□□□□ 0.02
TPM3-202ENST00000302206 PRDM11Q9NQV5 511 aa15.2■□□□□ 0.02
TPM3-202ENST00000302206 NWD2Q9ULI1 1742 aa15.2■□□□□ 0.02
TPM3-202ENST00000302206 MEGF6O75095 1541 aa15.19■□□□□ 0.02
TPM3-202ENST00000302206 ZBTB7BO15156 539 aaPredicted RBP15.19■□□□□ 0.02
TPM3-202ENST00000302206 VPS72Q15906 364 aa15.19■□□□□ 0.02
TPM3-202ENST00000302206 STK31Q9BXU1 1019 aa15.19■□□□□ 0.02
TPM3-202ENST00000302206 PARP4Q9UKK3 1724 aaKnown RBP15.19■□□□□ 0.02
TPM3-202ENST00000302206 COL5A2P05997 1499 aaPredicted RBP15.19■□□□□ 0.02
TPM3-202ENST00000302206 PLCH1Q4KWH8 1693 aa15.19■□□□□ 0.02
TPM3-202ENST00000302206 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
TPM3-202ENST00000302206 A0A0G2JS52 829 aa15.18■□□□□ 0.02
TPM3-202ENST00000302206 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
TPM3-202ENST00000302206 MYT1Q01538 1121 aa15.18■□□□□ 0.02
TPM3-202ENST00000302206 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
TPM3-202ENST00000302206 MRC1P22897 1456 aa15.17■□□□□ 0.02
TPM3-202ENST00000302206 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
TPM3-202ENST00000302206 HSP90AB1P08238 724 aaKnown RBP15.17■□□□□ 0.02
TPM3-202ENST00000302206 HEG1Q9ULI3 1381 aa15.16■□□□□ 0.02
TPM3-202ENST00000302206 BTBD11A6QL63 1104 aa15.16■□□□□ 0.02
TPM3-202ENST00000302206 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
TPM3-202ENST00000302206 PHKG2P15735 406 aa15.16■□□□□ 0.02
TPM3-202ENST00000302206 IFNL2Q8IZJ0 200 aa15.16■□□□□ 0.02
TPM3-202ENST00000302206 CARD10Q9BWT7 1032 aa15.16■□□□□ 0.02
TPM3-202ENST00000302206 YY1P25490 414 aa15.15■□□□□ 0.02
TPM3-202ENST00000302206 R3HDM1Q15032 1099 aaKnown RBP15.15■□□□□ 0.02
TPM3-202ENST00000302206 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
TPM3-202ENST00000302206 COL14A1Q05707 1796 aaKnown RBP15.14■□□□□ 0.01
TPM3-202ENST00000302206 N4BP2Q86UW6 1770 aaPredicted RBP15.14■□□□□ 0.01
TPM3-202ENST00000302206 CCT4P50991 539 aaKnown RBP15.14■□□□□ 0.01
TPM3-202ENST00000302206 SMC5Q8IY18 1101 aa15.14■□□□□ 0.01
TPM3-202ENST00000302206 DCAF5Q96JK2 942 aa15.14■□□□□ 0.01
TPM3-202ENST00000302206 KDM6AO15550 1401 aaPredicted RBP15.14■□□□□ 0.01
TPM3-202ENST00000302206 PDE4AP27815 886 aa15.13■□□□□ 0.01
TPM3-202ENST00000302206 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
TPM3-202ENST00000302206 BACH2Q9BYV9 841 aa15.13■□□□□ 0.01
TPM3-202ENST00000302206 FLIIQ13045 1269 aa15.12■□□□□ 0.01
TPM3-202ENST00000302206 HDGFL1Q5TGJ6 251 aa15.12■□□□□ 0.01
TPM3-202ENST00000302206 TOM1L2Q6ZVM7 507 aa15.12■□□□□ 0.01
TPM3-202ENST00000302206 SLC52A2Q9HAB3 445 aa15.12■□□□□ 0.01
TPM3-202ENST00000302206 MSH5O43196 834 aa15.11■□□□□ 0.01
TPM3-202ENST00000302206 G2E3Q7L622 706 aa15.11■□□□□ 0.01
TPM3-202ENST00000302206 PDZRN3Q9UPQ7 1066 aa15.11■□□□□ 0.01
TPM3-202ENST00000302206 PCDH11XQ9BZA7 1347 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms