RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 STMN4Q9H169 189 aaPredicted RBP13.13□□□□□ -0.31
GCN1-201ENST00000300648 FAM193AP78312 1265 aa13.13□□□□□ -0.31
GCN1-201ENST00000300648 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
GCN1-201ENST00000300648 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
GCN1-201ENST00000300648 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
GCN1-201ENST00000300648 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
GCN1-201ENST00000300648 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
GCN1-201ENST00000300648 FAM114A1Q8IWE2 563 aa13.13□□□□□ -0.31
GCN1-201ENST00000300648 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
GCN1-201ENST00000300648 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
GCN1-201ENST00000300648 SRRTQ9BXP5 876 aaKnown RBP13.12□□□□□ -0.31
GCN1-201ENST00000300648 SKIDA1Q1XH10 827 aa13.12□□□□□ -0.31
GCN1-201ENST00000300648 NSRP1Q9H0G5 558 aaKnown RBP13.12□□□□□ -0.31
GCN1-201ENST00000300648 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
GCN1-201ENST00000300648 PLVAPQ9BX97 442 aa13.12□□□□□ -0.31
GCN1-201ENST00000300648 HMGB1P1B2RPK0 211 aaPredicted RBP13.12□□□□□ -0.31
GCN1-201ENST00000300648 SMARCC1Q92922 1105 aaPredicted RBP13.12□□□□□ -0.31
GCN1-201ENST00000300648 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
GCN1-201ENST00000300648 YEATS4O95619 227 aa13.12□□□□□ -0.31
GCN1-201ENST00000300648 TOP1P11387 765 aaKnown RBP13.12□□□□□ -0.31
GCN1-201ENST00000300648 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 ANKS4BQ8N8V4 417 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
GCN1-201ENST00000300648 TNIP1Q15025 636 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 CETN1Q12798 172 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 STX1AQ16623 288 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 CEP112Q8N8E3 955 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 FERMT1Q9BQL6 677 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 ANAPC15P60006 121 aa13.11□□□□□ -0.31
GCN1-201ENST00000300648 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
GCN1-201ENST00000300648 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 PRXQ9BXM0 1461 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 CCDC172P0C7W6 258 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 HSPA4P34932 840 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 NSD2O96028 1365 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
GCN1-201ENST00000300648 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 KIAA0586Q9BVV6 1533 aa13.1□□□□□ -0.31
GCN1-201ENST00000300648 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 NEBLO76041 1014 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 SYCE3A1L190 88 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 TTC14Q96N46 770 aa13.09□□□□□ -0.31
GCN1-201ENST00000300648 SSR1P43307 286 aaKnown RBP13.09□□□□□ -0.31
GCN1-201ENST00000300648 A6NNZ2 444 aa13.08□□□□□ -0.32
GCN1-201ENST00000300648 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
GCN1-201ENST00000300648 TUBB8Q3ZCM7 444 aa13.08□□□□□ -0.32
GCN1-201ENST00000300648 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.32
GCN1-201ENST00000300648 GSTTP1A0A1W2PQM5 241 aa13.08□□□□□ -0.32
GCN1-201ENST00000300648 NOB1Q9ULX3 412 aaKnown RBP13.08□□□□□ -0.32
GCN1-201ENST00000300648 CEBPZQ03701 1054 aaKnown RBP13.08□□□□□ -0.32
GCN1-201ENST00000300648 FSD2A1L4K1 749 aa13.08□□□□□ -0.32
GCN1-201ENST00000300648 PRPHP41219 470 aa13.07□□□□□ -0.32
GCN1-201ENST00000300648 MTHFSP49914 203 aa13.07□□□□□ -0.32
GCN1-201ENST00000300648 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
GCN1-201ENST00000300648 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
GCN1-201ENST00000300648 GLRX3O76003 335 aaKnown RBP13.07□□□□□ -0.32
GCN1-201ENST00000300648 LRRC27Q9C0I9 530 aa13.07□□□□□ -0.32
GCN1-201ENST00000300648 CNNM1Q9NRU3 951 aa13.07□□□□□ -0.32
GCN1-201ENST00000300648 SEPT11Q9NVA2 429 aaKnown RBP13.07□□□□□ -0.32
GCN1-201ENST00000300648 ALDH1L2Q3SY69 923 aa13.07□□□□□ -0.32
GCN1-201ENST00000300648 CACNA2D4Q7Z3S7 1137 aa13.07□□□□□ -0.32
GCN1-201ENST00000300648 PRG4Q92954 1404 aaPredicted RBP13.06□□□□□ -0.32
GCN1-201ENST00000300648 ATP2B1P20020 1258 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
GCN1-201ENST00000300648 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 CTAGE1Q96RT6 745 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 HDGFL1Q5TGJ6 251 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 FYB1O15117 783 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 AMPD3Q01432 767 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 FERP16591 822 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 CASTP20810 708 aaKnown RBP13.06□□□□□ -0.32
GCN1-201ENST00000300648 PPP4R3AQ6IN85 833 aa13.06□□□□□ -0.32
GCN1-201ENST00000300648 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
GCN1-201ENST00000300648 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
GCN1-201ENST00000300648 TNNT1P13805 278 aa13.05□□□□□ -0.32
GCN1-201ENST00000300648 JAKMIP1Q96N16 626 aaKnown RBP13.05□□□□□ -0.32
GCN1-201ENST00000300648 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
GCN1-201ENST00000300648 HMOX1P09601 288 aa13.05□□□□□ -0.32
GCN1-201ENST00000300648 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
GCN1-201ENST00000300648 FAM69CQ0P6D2 419 aa13.05□□□□□ -0.32
GCN1-201ENST00000300648 ARFGAP3Q9NP61 516 aa13.05□□□□□ -0.32
GCN1-201ENST00000300648 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
GCN1-201ENST00000300648 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 TTC12Q9H892 705 aaPredicted RBP13.04□□□□□ -0.32
GCN1-201ENST00000300648 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
GCN1-201ENST00000300648 BMP15O95972 392 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 MNAT1P51948 309 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms