RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 EYA1Q99502 592 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 NUP188Q5SRE5 1749 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 RAB11FIP3O75154 756 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 ARID4AP29374 1257 aaPredicted RBP3.97□□□□□ -1.77
HERC4-201ENST00000277817 PTK7Q13308 1070 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 TRPC6Q9Y210 931 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 CAMTA1Q9Y6Y1 1673 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 PAPPAQ13219 1627 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 SLC34A2O95436 690 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 NCLP19338 710 aaKnown RBP3.97□□□□□ -1.77
HERC4-201ENST00000277817 TRIM52Q96A61 297 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 MYT1LQ9UL68 1186 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 CLEC11AQ9Y240 323 aa3.97□□□□□ -1.77
HERC4-201ENST00000277817 LZTS3O60299 673 aaPredicted RBP3.96□□□□□ -1.77
HERC4-201ENST00000277817 PHF14O94880 888 aa3.96□□□□□ -1.77
HERC4-201ENST00000277817 MAMSTRQ6ZN01 415 aa3.96□□□□□ -1.77
HERC4-201ENST00000277817 STAG1Q8WVM7 1258 aa3.96□□□□□ -1.77
HERC4-201ENST00000277817 NRXN1Q9ULB1 1477 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 GRXCR2A6NFK2 248 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 ABL2P42684 1182 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 NLRP2Q9NX02 1062 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.96□□□□□ -1.78
HERC4-201ENST00000277817 PARP4Q9UKK3 1724 aaKnown RBP3.96□□□□□ -1.78
HERC4-201ENST00000277817 ANKRD26Q9UPS8 1709 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 BRWD3Q6RI45 1802 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 ENPP3O14638 875 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 RNF135Q8IUD6 432 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 GIPC2Q8TF65 315 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 PCDHB15Q9Y5E8 787 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 FAM135BQ49AJ0 1406 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 MIA2Q96PC5 1412 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 A2MP01023 1474 aa3.96□□□□□ -1.78
HERC4-201ENST00000277817 PARNO95453 639 aaKnown RBP3.95□□□□□ -1.78
HERC4-201ENST00000277817 B4GALNT3Q6L9W6 998 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 ANKRD62A6NC57 917 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 VIL1P09327 827 aaKnown RBP3.95□□□□□ -1.78
HERC4-201ENST00000277817 CCDC181Q5TID7 509 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 SBF2Q86WG5 1849 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 LMOD1P29536 600 aaPredicted RBP3.95□□□□□ -1.78
HERC4-201ENST00000277817 MARSP56192 900 aaKnown RBP3.95□□□□□ -1.78
HERC4-201ENST00000277817 SERINC3Q13530 473 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 KIF1BO60333 1816 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 UHRF1BP1Q6BDS2 1440 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 FMR1Q06787 632 aaKnown RBP eCLIP3.95□□□□□ -1.78
HERC4-201ENST00000277817 MICAL1Q8TDZ2 1067 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 SGSM3Q96HU1 749 aa3.95□□□□□ -1.78
HERC4-201ENST00000277817 TCEAL1Q15170 157 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 NME8Q8N427 588 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 EVI5LQ96CN4 794 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 FANCCQ00597 558 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 DSC3Q14574 896 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 LMO7Q8WWI1 1683 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 C2orf72A6NCS6 295 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 OATP04181 439 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 SDE2Q6IQ49 451 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 BACH2Q9BYV9 841 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 METTL14Q9HCE5 456 aaKnown RBP3.94□□□□□ -1.78
HERC4-201ENST00000277817 NRKQ7Z2Y5 1582 aa3.94□□□□□ -1.78
HERC4-201ENST00000277817 TGIF2Q9GZN2 237 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 DUOX1Q9NRD9 1551 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 PTPRUQ92729 1446 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 VAC14Q08AM6 782 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 EPS8L1Q8TE68 723 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 METTL5Q9NRN9 209 aaKnown RBP3.93□□□□□ -1.78
HERC4-201ENST00000277817 PCDHGC3Q9UN70 934 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 MOXD2PA6NHM9 499 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 EXOC8Q8IYI6 725 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 KIF13BQ9NQT8 1826 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 EVI5O60447 810 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 CRTC2Q53ET0 693 aaPredicted RBP3.93□□□□□ -1.78
HERC4-201ENST00000277817 ZNF326Q5BKZ1 582 aaKnown RBP3.93□□□□□ -1.78
HERC4-201ENST00000277817 EPAS1Q99814 870 aa3.93□□□□□ -1.78
HERC4-201ENST00000277817 CCDC141Q6ZP82 1450 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 ANP32CO43423 234 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 DPY19L2Q6NUT2 758 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 PCDHGA10Q9Y5H3 936 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 BCL9LQ86UU0 1499 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 CCDC194A0A1B0GVG4 234 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 SWI5Q1ZZU3 235 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 MAF1Q9H063 256 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 NOVA2Q9UNW9 492 aaKnown RBP3.92□□□□□ -1.78
HERC4-201ENST00000277817 CLIP1P30622 1438 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 KIAA1551Q9HCM1 1747 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 FAM208AQ9UK61 1670 aaKnown RBP3.92□□□□□ -1.78
HERC4-201ENST00000277817 SCAMP3O14828 347 aaKnown RBP3.92□□□□□ -1.78
HERC4-201ENST00000277817 RFX1P22670 979 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 SERPINB4P48594 390 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 RGL4Q8IZJ4 473 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 DDX12PQ92771 950 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 FAM198AQ9UFP1 575 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 DISP2A7MBM2 1401 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 ITSN1Q15811 1721 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 PIK3R4Q99570 1358 aa3.92□□□□□ -1.78
HERC4-201ENST00000277817 ICMTO60725 284 aa3.91□□□□□ -1.78
HERC4-201ENST00000277817 PPFIA4O75335 1185 aa3.91□□□□□ -1.78
HERC4-201ENST00000277817 JAZF1Q86VZ6 243 aa3.91□□□□□ -1.78
HERC4-201ENST00000277817 USP17L15C9J2P7 530 aa3.91□□□□□ -1.78
HERC4-201ENST00000277817 USP17L10C9JJH3 530 aa3.91□□□□□ -1.78
HERC4-201ENST00000277817 USP17L13C9JLJ4 530 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms