RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 NRAPQ86VF7 1730 aa16.01■□□□□ 0.15
CAPN9-201ENST00000271971 ATF7IPQ6VMQ6 1270 aa16■□□□□ 0.15
CAPN9-201ENST00000271971 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
CAPN9-201ENST00000271971 KCNQ3O43525 872 aa16■□□□□ 0.15
CAPN9-201ENST00000271971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.15
CAPN9-201ENST00000271971 IL2RBP14784 551 aa15.99■□□□□ 0.15
CAPN9-201ENST00000271971 DZIP1LQ8IYY4 767 aaKnown RBP15.99■□□□□ 0.15
CAPN9-201ENST00000271971 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
CAPN9-201ENST00000271971 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
CAPN9-201ENST00000271971 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
CAPN9-201ENST00000271971 PLEKHG2Q9H7P9 1386 aa15.97■□□□□ 0.15
CAPN9-201ENST00000271971 BRPF1P55201 1214 aaPredicted RBP15.97■□□□□ 0.15
CAPN9-201ENST00000271971 NECTIN2Q92692 538 aa15.97■□□□□ 0.15
CAPN9-201ENST00000271971 BABAM1Q9NWV8 329 aa15.97■□□□□ 0.15
CAPN9-201ENST00000271971 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
CAPN9-201ENST00000271971 PCDH11XQ9BZA7 1347 aa15.96■□□□□ 0.15
CAPN9-201ENST00000271971 PCDH11YQ9BZA8 1340 aa15.96■□□□□ 0.15
CAPN9-201ENST00000271971 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
CAPN9-201ENST00000271971 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
CAPN9-201ENST00000271971 TMEM57Q8N5G2 664 aa15.95■□□□□ 0.14
CAPN9-201ENST00000271971 EIF4A1P60842 406 aaKnown RBP15.95■□□□□ 0.14
CAPN9-201ENST00000271971 ITPRIPQ8IWB1 547 aa15.95■□□□□ 0.14
CAPN9-201ENST00000271971 MRC1P22897 1456 aa15.95■□□□□ 0.14
CAPN9-201ENST00000271971 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
CAPN9-201ENST00000271971 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
CAPN9-201ENST00000271971 JCADQ9P266 1359 aa15.94■□□□□ 0.14
CAPN9-201ENST00000271971 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
CAPN9-201ENST00000271971 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
CAPN9-201ENST00000271971 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
CAPN9-201ENST00000271971 DCAF5Q96JK2 942 aa15.94■□□□□ 0.14
CAPN9-201ENST00000271971 CACNA1FO60840 1977 aa15.94■□□□□ 0.14
CAPN9-201ENST00000271971 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
CAPN9-201ENST00000271971 C5P01031 1676 aa15.93■□□□□ 0.14
CAPN9-201ENST00000271971 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
CAPN9-201ENST00000271971 MS4A1P11836 297 aa15.93■□□□□ 0.14
CAPN9-201ENST00000271971 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
CAPN9-201ENST00000271971 DISP2A7MBM2 1401 aa15.93■□□□□ 0.14
CAPN9-201ENST00000271971 RGS12O14924 1447 aa15.92■□□□□ 0.14
CAPN9-201ENST00000271971 G2E3Q7L622 706 aa15.92■□□□□ 0.14
CAPN9-201ENST00000271971 SLIT2O94813 1529 aa15.92■□□□□ 0.14
CAPN9-201ENST00000271971 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
CAPN9-201ENST00000271971 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
CAPN9-201ENST00000271971 ABCC4O15439 1325 aa15.91■□□□□ 0.14
CAPN9-201ENST00000271971 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
CAPN9-201ENST00000271971 LRP6O75581 1613 aa15.91■□□□□ 0.14
CAPN9-201ENST00000271971 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
CAPN9-201ENST00000271971 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
CAPN9-201ENST00000271971 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
CAPN9-201ENST00000271971 CCDC30Q5VVM6 783 aa15.9■□□□□ 0.14
CAPN9-201ENST00000271971 STK31Q9BXU1 1019 aa15.9■□□□□ 0.14
CAPN9-201ENST00000271971 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
CAPN9-201ENST00000271971 C8orf37Q96NL8 207 aa15.9■□□□□ 0.14
CAPN9-201ENST00000271971 HSPA1LP34931 641 aa15.89■□□□□ 0.13
CAPN9-201ENST00000271971 CABP4P57796 275 aa15.89■□□□□ 0.13
CAPN9-201ENST00000271971 ZNF790Q6PG37 636 aa15.89■□□□□ 0.13
CAPN9-201ENST00000271971 API5Q9BZZ5 524 aaKnown RBP15.89■□□□□ 0.13
CAPN9-201ENST00000271971 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
CAPN9-201ENST00000271971 DDX19BQ9UMR2 479 aa15.89■□□□□ 0.13
CAPN9-201ENST00000271971 PCDHB15Q9Y5E8 787 aa15.89■□□□□ 0.13
CAPN9-201ENST00000271971 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
CAPN9-201ENST00000271971 SPATA31A1Q5TZJ5 1347 aa15.88■□□□□ 0.13
CAPN9-201ENST00000271971 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
CAPN9-201ENST00000271971 SKAP1Q86WV1 359 aa15.87■□□□□ 0.13
CAPN9-201ENST00000271971 CCDC9Q9Y3X0 531 aaKnown RBP15.87■□□□□ 0.13
CAPN9-201ENST00000271971 ITGB4P16144 1822 aa15.87■□□□□ 0.13
CAPN9-201ENST00000271971 GLI3P10071 1580 aa15.87■□□□□ 0.13
CAPN9-201ENST00000271971 PTPRCP08575 1304 aa15.87■□□□□ 0.13
CAPN9-201ENST00000271971 GIGYF1O75420 1035 aaPredicted RBP15.87■□□□□ 0.13
CAPN9-201ENST00000271971 CHPF2Q9P2E5 772 aa15.87■□□□□ 0.13
CAPN9-201ENST00000271971 F6X3S4 739 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 IGHDP01880 384 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 ANXA1P04083 346 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 NKX1-1Q15270 411 aaPredicted RBP15.86■□□□□ 0.13
CAPN9-201ENST00000271971 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 HOXB7P09629 217 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 FLIIQ13045 1269 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 ZNF496Q96IT1 587 aaPredicted RBP15.86■□□□□ 0.13
CAPN9-201ENST00000271971 NGLY1Q96IV0 654 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 TNS2Q63HR2 1409 aa15.86■□□□□ 0.13
CAPN9-201ENST00000271971 SPATA31A5Q5VU36 1347 aa15.85■□□□□ 0.13
CAPN9-201ENST00000271971 SPATA31A7Q8IWB4 1347 aa15.85■□□□□ 0.13
CAPN9-201ENST00000271971 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
CAPN9-201ENST00000271971 BCL9LQ86UU0 1499 aa15.85■□□□□ 0.13
CAPN9-201ENST00000271971 FKBP5Q13451 457 aaPredicted RBP15.84■□□□□ 0.13
CAPN9-201ENST00000271971 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
CAPN9-201ENST00000271971 TTC5Q8N0Z6 440 aa15.84■□□□□ 0.13
CAPN9-201ENST00000271971 ZBTB40Q9NUA8 1239 aa15.84■□□□□ 0.13
CAPN9-201ENST00000271971 DOT1LQ8TEK3 1739 aa15.84■□□□□ 0.13
CAPN9-201ENST00000271971 SPATA31A6Q5VVP1 1343 aa15.84■□□□□ 0.13
CAPN9-201ENST00000271971 NBR1Q14596 966 aa15.84■□□□□ 0.13
CAPN9-201ENST00000271971 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
CAPN9-201ENST00000271971 ERVV-2B6SEH9 535 aa15.83■□□□□ 0.12
CAPN9-201ENST00000271971 PROSER3Q2NL68 480 aa15.83■□□□□ 0.12
CAPN9-201ENST00000271971 SLC4A10Q6U841 1118 aa15.83■□□□□ 0.12
CAPN9-201ENST00000271971 UNC5CLQ8IV45 518 aa15.83■□□□□ 0.12
CAPN9-201ENST00000271971 LAMB4A4D0S4 1761 aa15.83■□□□□ 0.12
CAPN9-201ENST00000271971 N4BP2Q86UW6 1770 aaPredicted RBP15.83■□□□□ 0.12
CAPN9-201ENST00000271971 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
CAPN9-201ENST00000271971 AAMPQ13685 434 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms