RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TBC1D32Q96NH3 1257 aa21.13■□□□□ 0.97
CHKA-201ENST00000265689 SOS2Q07890 1332 aaPredicted RBP21.13■□□□□ 0.97
CHKA-201ENST00000265689 FLIIQ13045 1269 aa21.12■□□□□ 0.97
CHKA-201ENST00000265689 CEP85Q6P2H3 762 aa21.12■□□□□ 0.97
CHKA-201ENST00000265689 CRYBG1Q9Y4K1 1723 aa21.12■□□□□ 0.97
CHKA-201ENST00000265689 AKAP4Q5JQC9 854 aa21.12■□□□□ 0.97
CHKA-201ENST00000265689 MPRIPQ6WCQ1 1025 aa21.12■□□□□ 0.97
CHKA-201ENST00000265689 NLRP2Q9NX02 1062 aa21.12■□□□□ 0.97
CHKA-201ENST00000265689 ERBB3P21860 1342 aa21.11■□□□□ 0.97
CHKA-201ENST00000265689 DCTPP1Q9H773 170 aa21.11■□□□□ 0.97
CHKA-201ENST00000265689 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
CHKA-201ENST00000265689 NCAPD2Q15021 1401 aa21.1■□□□□ 0.97
CHKA-201ENST00000265689 CCT4P50991 539 aaKnown RBP21.1■□□□□ 0.97
CHKA-201ENST00000265689 FKBP5Q13451 457 aaPredicted RBP21.1■□□□□ 0.97
CHKA-201ENST00000265689 RPAP2Q8IXW5 612 aaPredicted RBP21.1■□□□□ 0.97
CHKA-201ENST00000265689 FAM208AQ9UK61 1670 aaKnown RBP21.1■□□□□ 0.97
CHKA-201ENST00000265689 SOS1Q07889 1333 aaPredicted RBP21.1■□□□□ 0.97
CHKA-201ENST00000265689 MFAP1P55081 439 aaKnown RBP21.1■□□□□ 0.97
CHKA-201ENST00000265689 AMOTQ4VCS5 1084 aa21.1■□□□□ 0.97
CHKA-201ENST00000265689 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
CHKA-201ENST00000265689 KCNQ3O43525 872 aa21.09■□□□□ 0.97
CHKA-201ENST00000265689 CSB-PGBD3P0DP91 1061 aa21.09■□□□□ 0.97
CHKA-201ENST00000265689 HDGFL1Q5TGJ6 251 aa21.09■□□□□ 0.97
CHKA-201ENST00000265689 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.97
CHKA-201ENST00000265689 TEFQ10587 303 aa21.08■□□□□ 0.97
CHKA-201ENST00000265689 COL18A1P39060 1754 aa21.08■□□□□ 0.96
CHKA-201ENST00000265689 C1orf141Q5JVX7 400 aa21.08■□□□□ 0.96
CHKA-201ENST00000265689 LMO7Q8WWI1 1683 aa21.07■□□□□ 0.96
CHKA-201ENST00000265689 RNMTO43148 476 aaKnown RBP21.07■□□□□ 0.96
CHKA-201ENST00000265689 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
CHKA-201ENST00000265689 PRDM11Q9NQV5 511 aa21.07■□□□□ 0.96
CHKA-201ENST00000265689 EIF2S2P20042 333 aaKnown RBP21.06■□□□□ 0.96
CHKA-201ENST00000265689 BTBD11A6QL63 1104 aa21.06■□□□□ 0.96
CHKA-201ENST00000265689 USP35Q9P2H5 1018 aa21.06■□□□□ 0.96
CHKA-201ENST00000265689 PHAXQ9H814 394 aaKnown RBP21.05■□□□□ 0.96
CHKA-201ENST00000265689 DEKP35659 375 aaKnown RBP21.05■□□□□ 0.96
CHKA-201ENST00000265689 STRN4Q9NRL3 753 aa21.05■□□□□ 0.96
CHKA-201ENST00000265689 NHSL1Q5SYE7 1610 aa21.05■□□□□ 0.96
CHKA-201ENST00000265689 C16orf71Q8IYS4 520 aaPredicted RBP21.04■□□□□ 0.96
CHKA-201ENST00000265689 C22orf23Q9BZE7 217 aa21.04■□□□□ 0.96
CHKA-201ENST00000265689 CAMTA1Q9Y6Y1 1673 aa21.04■□□□□ 0.96
CHKA-201ENST00000265689 APBB1O00213 710 aa21.03■□□□□ 0.96
CHKA-201ENST00000265689 PLEKHM2Q8IWE5 1019 aa21.03■□□□□ 0.96
CHKA-201ENST00000265689 KDM3BQ7LBC6 1761 aa21.02■□□□□ 0.96
CHKA-201ENST00000265689 ABCA3Q99758 1704 aa21.02■□□□□ 0.95
CHKA-201ENST00000265689 SMARCA5O60264 1052 aaPredicted RBP21.02■□□□□ 0.95
CHKA-201ENST00000265689 GNAI2P04899 355 aa21.02■□□□□ 0.95
CHKA-201ENST00000265689 BECN1Q14457 450 aa21.01■□□□□ 0.95
CHKA-201ENST00000265689 OTUD7AQ8TE49 926 aaPredicted RBP21.01■□□□□ 0.95
CHKA-201ENST00000265689 CHPF2Q9P2E5 772 aa21.01■□□□□ 0.95
CHKA-201ENST00000265689 MEGF6O75095 1541 aa21■□□□□ 0.95
CHKA-201ENST00000265689 CACNA1FO60840 1977 aa21■□□□□ 0.95
CHKA-201ENST00000265689 HMMRO75330 724 aa21■□□□□ 0.95
CHKA-201ENST00000265689 HOXB7P09629 217 aa21■□□□□ 0.95
CHKA-201ENST00000265689 GSPT1P15170 499 aaKnown RBP20.99■□□□□ 0.95
CHKA-201ENST00000265689 RTL5Q5HYW3 569 aaPredicted RBP20.99■□□□□ 0.95
CHKA-201ENST00000265689 GNAI3P08754 354 aa20.99■□□□□ 0.95
CHKA-201ENST00000265689 RAPGEF4Q8WZA2 1011 aa20.99■□□□□ 0.95
CHKA-201ENST00000265689 ANXA1P04083 346 aa20.98■□□□□ 0.95
CHKA-201ENST00000265689 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
CHKA-201ENST00000265689 TBC1D9Q6ZT07 1266 aa20.97■□□□□ 0.95
CHKA-201ENST00000265689 OVOS2A0A0G2JMS6 1433 aa20.97■□□□□ 0.95
CHKA-201ENST00000265689 ADAMTS2O95450 1211 aa20.97■□□□□ 0.95
CHKA-201ENST00000265689 TOM1L2Q6ZVM7 507 aa20.97■□□□□ 0.95
CHKA-201ENST00000265689 TBC1D2Q9BYX2 928 aa20.97■□□□□ 0.95
CHKA-201ENST00000265689 USP44Q9H0E7 712 aa20.97■□□□□ 0.95
CHKA-201ENST00000265689 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
CHKA-201ENST00000265689 PXDNLA1KZ92 1463 aa20.95■□□□□ 0.94
CHKA-201ENST00000265689 PNMA6EA0A0J9YXQ4 647 aa20.95■□□□□ 0.94
CHKA-201ENST00000265689 TTC22Q5TAA0 569 aa20.95■□□□□ 0.94
CHKA-201ENST00000265689 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
CHKA-201ENST00000265689 NUTM2BA6NNL0 878 aaPredicted RBP20.95■□□□□ 0.94
CHKA-201ENST00000265689 NUTM2EB1AL46 878 aaPredicted RBP20.95■□□□□ 0.94
CHKA-201ENST00000265689 TATP17735 454 aaPredicted RBP20.95■□□□□ 0.94
CHKA-201ENST00000265689 NUTM2AQ8IVF1 878 aaPredicted RBP20.95■□□□□ 0.94
CHKA-201ENST00000265689 GIGYF1O75420 1035 aaPredicted RBP20.94■□□□□ 0.94
CHKA-201ENST00000265689 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
CHKA-201ENST00000265689 CPDO75976 1380 aa20.94■□□□□ 0.94
CHKA-201ENST00000265689 ATP8B2P98198 1209 aa20.94■□□□□ 0.94
CHKA-201ENST00000265689 BTG4Q9NY30 223 aa20.94■□□□□ 0.94
CHKA-201ENST00000265689 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
CHKA-201ENST00000265689 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
CHKA-201ENST00000265689 CHMP4AQ9BY43 222 aa20.93■□□□□ 0.94
CHKA-201ENST00000265689 CDC45O75419 566 aa20.93■□□□□ 0.94
CHKA-201ENST00000265689 SRCIN1Q9C0H9 1055 aa20.93■□□□□ 0.94
CHKA-201ENST00000265689 EP400Q96L91 3159 aa20.92■□□□□ 0.94
CHKA-201ENST00000265689 COL5A2P05997 1499 aaPredicted RBP20.92■□□□□ 0.94
CHKA-201ENST00000265689 HEG1Q9ULI3 1381 aa20.92■□□□□ 0.94
CHKA-201ENST00000265689 UBAP1LF5GYI3 381 aa20.92■□□□□ 0.94
CHKA-201ENST00000265689 UBTFL1P0CB47 393 aaPredicted RBP20.92■□□□□ 0.94
CHKA-201ENST00000265689 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
CHKA-201ENST00000265689 RBM25P49756 843 aaKnown RBP20.92■□□□□ 0.94
CHKA-201ENST00000265689 NFKBIBQ15653 356 aa20.92■□□□□ 0.94
CHKA-201ENST00000265689 PROSER3Q2NL68 480 aa20.92■□□□□ 0.94
CHKA-201ENST00000265689 DNAAF4Q8WXU2 420 aa20.92■□□□□ 0.94
CHKA-201ENST00000265689 SPG7Q9UQ90 795 aa20.92■□□□□ 0.94
CHKA-201ENST00000265689 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
CHKA-201ENST00000265689 PHKG2P15735 406 aa20.91■□□□□ 0.94
CHKA-201ENST00000265689 DBF4Q9UBU7 674 aaPredicted RBP20.91■□□□□ 0.94
CHKA-201ENST00000265689 SLKQ9H2G2 1235 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms