RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 AQRO60306 1485 aaKnown RBP eCLIP4.76□□□□□ -1.65
RNF38-201ENST00000259605 HSPA2P54652 639 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 ANAPC15P60006 121 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 IFIT5Q13325 482 aaKnown RBP4.76□□□□□ -1.65
RNF38-201ENST00000259605 IPO9Q96P70 1041 aaKnown RBP4.76□□□□□ -1.65
RNF38-201ENST00000259605 ANKRD62A6NC57 917 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 ATP6V1AP38606 617 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 HS1BP3Q53T59 392 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 RNF41Q9H4P4 317 aaPredicted RBP4.76□□□□□ -1.65
RNF38-201ENST00000259605 DDX19BQ9UMR2 479 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 FANCAO15360 1455 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 SYNJ1O43426 1573 aa4.76□□□□□ -1.65
RNF38-201ENST00000259605 RIOK3O14730 519 aaKnown RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 ZEB2O60315 1214 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 CETN1Q12798 172 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 LARP1Q6PKG0 1096 aaKnown RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 CCDC73Q6ZRK6 1079 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 FAM196AQ6ZSG2 479 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 LBHD1Q9BQE6 289 aaPredicted RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 CNTLNQ9NXG0 1405 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 ALDH1B1P30837 517 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 GPS2Q13227 327 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 CCDC181Q5TID7 509 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 OLFM4Q6UX06 510 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 CDC37L1Q7L3B6 337 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 USP48Q86UV5 1035 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 CKAP2LQ8IYA6 745 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 QTRT2Q9H974 415 aaKnown RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 HAUS2Q9NVX0 235 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 MRPS9P82933 396 aaKnown RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 SLC4A8Q2Y0W8 1093 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 DCAF15Q66K64 600 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 HOMER1Q86YM7 354 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 TRIM5Q9C035 493 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 SPON1Q9HCB6 807 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 CCNL1Q9UK58 526 aaPredicted RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 NCAPD3P42695 1498 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 ATP5J2-PTCD1G3V325 749 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 CCNA1P78396 465 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 IRX3P78415 501 aaPredicted RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 FILIP1LQ4L180 1135 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 ARMC9Q7Z3E5 817 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 IQCA1Q86XH1 822 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 PRPF31Q8WWY3 499 aaKnown RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 SRCIN1Q9C0H9 1055 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 ORC3Q9UBD5 711 aaPredicted RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 KDM2BQ8NHM5 1336 aa4.75□□□□□ -1.65
RNF38-201ENST00000259605 RPRD2Q5VT52 1461 aaKnown RBP4.75□□□□□ -1.65
RNF38-201ENST00000259605 MROH2BQ7Z745 1585 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 YEATS2Q9ULM3 1422 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 CCDC196A0A1B0GTZ2 297 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 ERLIN2O94905 339 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 TMEM266Q2M3C6 531 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 B4GALNT3Q6L9W6 998 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 ZCRB1Q8TBF4 217 aaKnown RBP4.74□□□□□ -1.65
RNF38-201ENST00000259605 PNMA2Q9UL42 364 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 PLS1Q14651 629 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 CNKSR1Q969H4 720 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 ANKRD2Q9GZV1 360 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 HMGB1P1B2RPK0 211 aaPredicted RBP4.74□□□□□ -1.65
RNF38-201ENST00000259605 SSBP05455 408 aaKnown RBP eCLIP4.74□□□□□ -1.65
RNF38-201ENST00000259605 MYL6BP14649 208 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 NUCB2P80303 420 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 CENPQQ7L2Z9 268 aaPredicted RBP4.74□□□□□ -1.65
RNF38-201ENST00000259605 AS3MTQ9HBK9 375 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 GPBP1L1Q9HC44 474 aaPredicted RBP4.74□□□□□ -1.65
RNF38-201ENST00000259605 STK24Q9Y6E0 443 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 CCDC88BA6NC98 1476 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 EIF4E1BA6NMX2 242 aaKnown RBP4.74□□□□□ -1.65
RNF38-201ENST00000259605 PDE4BQ07343 736 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 CTCFLQ8NI51 663 aaPredicted RBP4.74□□□□□ -1.65
RNF38-201ENST00000259605 RAD50Q92878 1312 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 WDR7Q9Y4E6 1490 aa4.74□□□□□ -1.65
RNF38-201ENST00000259605 IL2RBP14784 551 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 CEBPAP49715 358 aaPredicted RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 RUNDC1Q96C34 613 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 GGNBP2Q9H3C7 697 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 RBM19Q9Y4C8 960 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 NEFHP12036 1026 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 CCT4P50991 539 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 NOM1Q5C9Z4 860 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 CERS3Q8IU89 383 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 C2orf69Q8N8R5 385 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 CNBD1Q8NA66 436 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 NUDT16Q96DE0 195 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 IQCA1LA6NCM1 817 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 WASLO00401 505 aaPredicted RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 DKC1O60832 514 aaKnown RBP eCLIP4.73□□□□□ -1.65
RNF38-201ENST00000259605 SURF6O75683 361 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 HMOX1P09601 288 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 ECE1P42892 770 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 AAMPQ13685 434 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 TCHPQ9BT92 498 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 MBIPQ9NS73 344 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 HFM1A2PYH4 1435 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 IDH1O75874 414 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 HSPA5P11021 654 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 KIF5BP33176 963 aa4.73□□□□□ -1.65
RNF38-201ENST00000259605 SEPT7Q16181 437 aaKnown RBP4.73□□□□□ -1.65
RNF38-201ENST00000259605 ANKRD45Q5TZF3 282 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms