RNA–Protein interactions for RNA: ENST00000254605.10

RRP8-201, Transcript of ribosomal RNA processing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP8, Length 6,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-201ENST00000254605 C8orf37Q96NL8 207 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 CKAP2LQ8IYA6 745 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 IQSEC3Q9UPP2 1182 aaPredicted RBP10.16□□□□□ -0.78
RRP8-201ENST00000254605 IGF1RP08069 1367 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 AKNAD1Q5T1N1 836 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 RTEL1-TNFRSF6BF6WH68 1400 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 CNTLNQ9NXG0 1405 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 IFT140Q96RY7 1462 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 ZSCAN25Q6NSZ9 544 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 CUL5Q93034 780 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 PDRG1Q9NUG6 133 aa10.16□□□□□ -0.78
RRP8-201ENST00000254605 FOXO3O43524 673 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 HIP1O00291 1037 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 ATP2B3Q16720 1220 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 FERMT3Q86UX7 667 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 ERCC4Q92889 916 aaPredicted RBP10.15□□□□□ -0.78
RRP8-201ENST00000254605 ZNF652Q9Y2D9 606 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 PICALMQ13492 652 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 ISM2Q6H9L7 571 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 RGS22Q8NE09 1264 aa10.15□□□□□ -0.78
RRP8-201ENST00000254605 RFC4P35249 363 aa10.15□□□□□ -0.79
RRP8-201ENST00000254605 FAM212AQ96EL1 285 aa10.15□□□□□ -0.79
RRP8-201ENST00000254605 BICD1Q96G01 975 aa10.15□□□□□ -0.79
RRP8-201ENST00000254605 CCDC8Q9H0W5 538 aaPredicted RBP10.15□□□□□ -0.79
RRP8-201ENST00000254605 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.79
RRP8-201ENST00000254605 CASTP20810 708 aaKnown RBP10.14□□□□□ -0.79
RRP8-201ENST00000254605 CTNNA2P26232 953 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 FILIP1Q7Z7B0 1213 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 CPLX3Q8WVH0 158 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 JAG2Q9Y219 1238 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 HOMER2Q9NSB8 354 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 SP4Q02446 784 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 VEZTQ9HBM0 779 aa10.14□□□□□ -0.79
RRP8-201ENST00000254605 GSTTP1A0A1W2PQM5 241 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 CSPG5O95196 566 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 SPATA32Q96LK8 384 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 NF2P35240 595 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 SNRKQ9NRH2 765 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 ZBED9Q6R2W3 1325 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 IMMTQ16891 758 aaKnown RBP10.13□□□□□ -0.79
RRP8-201ENST00000254605 BLOC1S2Q6QNY1 142 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 DYDC1Q8WWB3 177 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 PPP2R1AP30153 589 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 PIP4K2AP48426 406 aaPredicted RBP10.13□□□□□ -0.79
RRP8-201ENST00000254605 GRIPAP1Q4V328 841 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 TCERG1LQ5VWI1 586 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 PROCA1Q8NCQ7 364 aaPredicted RBP10.13□□□□□ -0.79
RRP8-201ENST00000254605 ATP5J2-PTCD1G3V325 749 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 CBX1P83916 185 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 JAKMIP3Q5VZ66 844 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 JMYQ8N9B5 988 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 CCDC150Q8NCX0 1101 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 TAF4BQ92750 862 aa10.13□□□□□ -0.79
RRP8-201ENST00000254605 ERICH4A6NGS2 130 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 CCT2P78371 535 aaKnown RBP10.12□□□□□ -0.79
RRP8-201ENST00000254605 LEKR1Q6ZMV7 388 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 NAPBQ9H115 298 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 SMC1AQ14683 1233 aaKnown RBP10.12□□□□□ -0.79
RRP8-201ENST00000254605 SYNJ1O43426 1573 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 TOPBP1Q92547 1522 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.12□□□□□ -0.79
RRP8-201ENST00000254605 OTUD6BQ8N6M0 293 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 PRPF4BQ13523 1007 aaKnown RBP10.12□□□□□ -0.79
RRP8-201ENST00000254605 SYNJ2O15056 1496 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 RRBP1Q9P2E9 1410 aaKnown RBP10.12□□□□□ -0.79
RRP8-201ENST00000254605 UBAP1LF5GYI3 381 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
RRP8-201ENST00000254605 LUC7LQ9NQ29 371 aaKnown RBP10.12□□□□□ -0.79
RRP8-201ENST00000254605 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
RRP8-201ENST00000254605 TRAK2O60296 914 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 RFX1P22670 979 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 LMAN1P49257 510 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 NLRP5P59047 1200 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 CCDC83Q8IWF9 413 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 ZNF692Q9BU19 519 aaPredicted RBP10.11□□□□□ -0.79
RRP8-201ENST00000254605 ZBTB21Q9ULJ3 1066 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 FGD6Q6ZV73 1430 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 RIMBP2O15034 1052 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 LARP1Q6PKG0 1096 aaKnown RBP10.11□□□□□ -0.79
RRP8-201ENST00000254605 SYCP3Q8IZU3 236 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
RRP8-201ENST00000254605 GJA3Q9Y6H8 435 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 IFIT1P09914 478 aaKnown RBP10.11□□□□□ -0.79
RRP8-201ENST00000254605 GJC1P36383 396 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 HAND2P61296 217 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 PABPN1LA6NDY0 278 aaKnown RBP10.11□□□□□ -0.79
RRP8-201ENST00000254605 PRKG1Q13976 671 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 DACH1Q9UI36 760 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 TMCO5BA8MYB1 307 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 NUDT16Q96DE0 195 aaKnown RBP10.11□□□□□ -0.79
RRP8-201ENST00000254605 F6X3S4 739 aa10.11□□□□□ -0.79
RRP8-201ENST00000254605 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms