RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 RRP7AQ9Y3A4 280 aaKnown RBP11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 IL16Q14005 1332 aa11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 RAPGEF4Q8WZA2 1011 aa11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 RTF1Q92541 710 aaKnown RBP11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 RGPD2P0DJD1 1756 aa11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
EXOSC9-201ENST00000243498 SPATA31A6Q5VVP1 1343 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 EFCAB3Q8N7B9 438 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 PHACTR3Q96KR7 559 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 CAMTA1Q9Y6Y1 1673 aa11.85□□□□□ -0.51
EXOSC9-201ENST00000243498 LMO7Q8WWI1 1683 aa11.84□□□□□ -0.51
EXOSC9-201ENST00000243498 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
EXOSC9-201ENST00000243498 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
EXOSC9-201ENST00000243498 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
EXOSC9-201ENST00000243498 NCAPD2Q15021 1401 aa11.84□□□□□ -0.51
EXOSC9-201ENST00000243498 FAM83GA6ND36 823 aa11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 GNAT3A8MTJ3 354 aa11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 GNAI1P63096 354 aa11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 MTHFSDQ2M296 383 aaKnown RBP11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 CARD10Q9BWT7 1032 aa11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
EXOSC9-201ENST00000243498 NUTM2BA6NNL0 878 aaPredicted RBP11.82□□□□□ -0.52
EXOSC9-201ENST00000243498 NUTM2EB1AL46 878 aaPredicted RBP11.82□□□□□ -0.52
EXOSC9-201ENST00000243498 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
EXOSC9-201ENST00000243498 NUTM2AQ8IVF1 878 aaPredicted RBP11.82□□□□□ -0.52
EXOSC9-201ENST00000243498 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
EXOSC9-201ENST00000243498 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
EXOSC9-201ENST00000243498 BTG4Q9NY30 223 aa11.82□□□□□ -0.52
EXOSC9-201ENST00000243498 ADAMTS2O95450 1211 aa11.81□□□□□ -0.52
EXOSC9-201ENST00000243498 NEFLP07196 543 aa11.81□□□□□ -0.52
EXOSC9-201ENST00000243498 TRMT2AQ8IZ69 625 aaKnown RBP11.81□□□□□ -0.52
EXOSC9-201ENST00000243498 CRB1P82279 1406 aa11.8□□□□□ -0.52
EXOSC9-201ENST00000243498 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
EXOSC9-201ENST00000243498 CT47B1P0C2W7 299 aaPredicted RBP11.8□□□□□ -0.52
EXOSC9-201ENST00000243498 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
EXOSC9-201ENST00000243498 DUSP27Q5VZP5 1158 aa11.8□□□□□ -0.52
EXOSC9-201ENST00000243498 IFT57Q9NWB7 429 aa11.8□□□□□ -0.52
EXOSC9-201ENST00000243498 PARP4Q9UKK3 1724 aaKnown RBP11.79□□□□□ -0.52
EXOSC9-201ENST00000243498 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
EXOSC9-201ENST00000243498 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
EXOSC9-201ENST00000243498 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 IL2RBP14784 551 aa11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 HSPA1LP34931 641 aa11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 ZNF530Q6P9A1 599 aaPredicted RBP11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 CDCA7Q9BWT1 371 aaPredicted RBP11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 RCAN3Q9UKA8 241 aa11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
EXOSC9-201ENST00000243498 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.52
EXOSC9-201ENST00000243498 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.52
EXOSC9-201ENST00000243498 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.77□□□□□ -0.52
EXOSC9-201ENST00000243498 NGLY1Q96IV0 654 aa11.77□□□□□ -0.52
EXOSC9-201ENST00000243498 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.52
EXOSC9-201ENST00000243498 MEX3CQ5U5Q3 659 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-201ENST00000243498 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
EXOSC9-201ENST00000243498 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-201ENST00000243498 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
EXOSC9-201ENST00000243498 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-201ENST00000243498 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
EXOSC9-201ENST00000243498 TEFQ10587 303 aa11.75□□□□□ -0.53
EXOSC9-201ENST00000243498 MCM10Q7L590 875 aa11.75□□□□□ -0.53
EXOSC9-201ENST00000243498 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
EXOSC9-201ENST00000243498 PCDH11XQ9BZA7 1347 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 PCDH11YQ9BZA8 1340 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 SLIT2O94813 1529 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 PKD1L3Q7Z443 1732 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 DCTN1Q14203 1278 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 TAF7Q15545 349 aaPredicted RBP11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 C8orf37Q96NL8 207 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
EXOSC9-201ENST00000243498 CHL1O00533 1208 aa11.73□□□□□ -0.53
EXOSC9-201ENST00000243498 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
EXOSC9-201ENST00000243498 PHKG2P15735 406 aa11.73□□□□□ -0.53
EXOSC9-201ENST00000243498 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
EXOSC9-201ENST00000243498 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
EXOSC9-201ENST00000243498 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
EXOSC9-201ENST00000243498 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms