RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SRPK2P78362 688 aaKnown RBP11□□□□□ -0.65
CXCR4-201ENST00000241393 USP4Q13107 963 aa11□□□□□ -0.65
CXCR4-201ENST00000241393 MKRN1Q9UHC7 482 aaKnown RBP11□□□□□ -0.65
CXCR4-201ENST00000241393 SKOR1P84550 965 aa10.99□□□□□ -0.65
CXCR4-201ENST00000241393 NCOA4Q13772 614 aa10.99□□□□□ -0.65
CXCR4-201ENST00000241393 ELOAQ14241 798 aaKnown RBP10.99□□□□□ -0.65
CXCR4-201ENST00000241393 KDM5BQ9UGL1 1544 aa10.99□□□□□ -0.65
CXCR4-201ENST00000241393 DNMT1P26358 1616 aaKnown RBP10.99□□□□□ -0.65
CXCR4-201ENST00000241393 CCER2I3L3R5 266 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 PCDHB11Q9Y5F2 797 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 DAPK1P53355 1430 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 NUP160Q12769 1436 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 TROQ12816 1431 aaPredicted RBP10.98□□□□□ -0.65
CXCR4-201ENST00000241393 FAM196BA6NMK8 535 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 WNT7AO00755 349 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 B4GALNT3Q6L9W6 998 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 LIAT1Q6ZQX7 453 aa10.98□□□□□ -0.65
CXCR4-201ENST00000241393 A0A0G2JS52 829 aa10.97□□□□□ -0.65
CXCR4-201ENST00000241393 ZBTB7CA1YPR0 619 aa10.97□□□□□ -0.65
CXCR4-201ENST00000241393 RASA1P20936 1047 aa10.97□□□□□ -0.65
CXCR4-201ENST00000241393 DEPDC4Q8N2C3 294 aa10.97□□□□□ -0.65
CXCR4-201ENST00000241393 CDK15Q96Q40 435 aa10.97□□□□□ -0.65
CXCR4-201ENST00000241393 DENND4BO75064 1496 aaPredicted RBP10.97□□□□□ -0.65
CXCR4-201ENST00000241393 CARMIL2Q6F5E8 1435 aa10.97□□□□□ -0.65
CXCR4-201ENST00000241393 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.65
CXCR4-201ENST00000241393 CDCA8Q53HL2 280 aa10.96□□□□□ -0.65
CXCR4-201ENST00000241393 ADCY10Q96PN6 1610 aa10.96□□□□□ -0.66
CXCR4-201ENST00000241393 CEP170Q5SW79 1584 aa10.96□□□□□ -0.66
CXCR4-201ENST00000241393 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
CXCR4-201ENST00000241393 RRP7BPQ9NSQ0 103 aa10.95□□□□□ -0.66
CXCR4-201ENST00000241393 V9GY48 417 aaPredicted RBP10.95□□□□□ -0.66
CXCR4-201ENST00000241393 ABCC5O15440 1437 aa10.95□□□□□ -0.66
CXCR4-201ENST00000241393 ITSN2Q9NZM3 1697 aa10.95□□□□□ -0.66
CXCR4-201ENST00000241393 NR5A1Q13285 461 aa10.95□□□□□ -0.66
CXCR4-201ENST00000241393 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
CXCR4-201ENST00000241393 SPRYD7Q5W111 196 aa10.94□□□□□ -0.66
CXCR4-201ENST00000241393 DNAAF2Q9NVR5 837 aaKnown RBP10.94□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L15C9J2P7 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L10C9JJH3 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L13C9JLJ4 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L11C9JVI0 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L21D6R901 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L18D6R9N7 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L22D6RA61 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L17D6RBQ6 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L19D6RCP7 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L20D6RJB6 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 RAB15P59190 212 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 USP17L24Q0WX57 530 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
CXCR4-201ENST00000241393 LARGE2Q8N3Y3 721 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 CHMP7Q8WUX9 453 aaPredicted RBP10.93□□□□□ -0.66
CXCR4-201ENST00000241393 MPHOSPH9Q99550 1183 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
CXCR4-201ENST00000241393 KDM6BO15054 1643 aa10.93□□□□□ -0.66
CXCR4-201ENST00000241393 ANP32CO43423 234 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 ADH1CP00326 375 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 INTS6LQ5JSJ4 861 aaKnown RBP10.92□□□□□ -0.66
CXCR4-201ENST00000241393 ZNF697Q5TEC3 545 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 FAM200AQ8TCP9 573 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
CXCR4-201ENST00000241393 ADGRL2O95490 1459 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 FSHRP23945 695 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 PSME1Q06323 249 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 OGFOD1Q8N543 542 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
CXCR4-201ENST00000241393 GTF2IP78347 998 aa10.91□□□□□ -0.66
CXCR4-201ENST00000241393 ANKRD30BQ9BXX2 1392 aa10.91□□□□□ -0.66
CXCR4-201ENST00000241393 RPRD2Q5VT52 1461 aaKnown RBP10.9□□□□□ -0.66
CXCR4-201ENST00000241393 GPATCH8Q9UKJ3 1502 aaKnown RBP10.9□□□□□ -0.66
CXCR4-201ENST00000241393 CAMSAP2Q08AD1 1489 aa10.9□□□□□ -0.67
CXCR4-201ENST00000241393 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 CCDC116Q8IYX3 515 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 MRGPRX2Q96LB1 330 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 WASF2Q9Y6W5 498 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 PRG4Q92954 1404 aaPredicted RBP10.89□□□□□ -0.67
CXCR4-201ENST00000241393 PLB1Q6P1J6 1458 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 ABCA8O94911 1581 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 ERVH48-1M5A8F1 160 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 PTK7Q13308 1070 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 CC2D2BQ6DHV5 1058 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 PRKD2Q9BZL6 878 aa10.89□□□□□ -0.67
CXCR4-201ENST00000241393 SIAH2O43255 324 aa10.88□□□□□ -0.67
CXCR4-201ENST00000241393 BRD1O95696 1058 aa10.88□□□□□ -0.67
CXCR4-201ENST00000241393 SUPT16HQ9Y5B9 1047 aaKnown RBP10.88□□□□□ -0.67
CXCR4-201ENST00000241393 EMILIN1Q9Y6C2 1016 aa10.88□□□□□ -0.67
CXCR4-201ENST00000241393 TLL2Q9Y6L7 1015 aa10.88□□□□□ -0.67
CXCR4-201ENST00000241393 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
CXCR4-201ENST00000241393 CROCC2H7BZ55 1655 aa10.88□□□□□ -0.67
CXCR4-201ENST00000241393 MYT1Q01538 1121 aa10.87□□□□□ -0.67
CXCR4-201ENST00000241393 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
CXCR4-201ENST00000241393 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
CXCR4-201ENST00000241393 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
CXCR4-201ENST00000241393 FOXC1Q12948 553 aa10.86□□□□□ -0.67
CXCR4-201ENST00000241393 TSGA10IPQ3SY00 556 aa10.86□□□□□ -0.67
CXCR4-201ENST00000241393 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms