RNA–Protein interactions for RNA: ENST00000240189.2

PRAMEF2-201, Transcript of PRAME family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF2, Length 1,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2-201ENST00000240189 SGIP1Q9BQI5 828 aa13.5□□□□□ -0.25
PRAMEF2-201ENST00000240189 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
PRAMEF2-201ENST00000240189 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
PRAMEF2-201ENST00000240189 C5P01031 1676 aa13.49□□□□□ -0.25
PRAMEF2-201ENST00000240189 PNPLA7Q6ZV29 1317 aa13.48□□□□□ -0.25
PRAMEF2-201ENST00000240189 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
PRAMEF2-201ENST00000240189 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
PRAMEF2-201ENST00000240189 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
PRAMEF2-201ENST00000240189 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
PRAMEF2-201ENST00000240189 RBM19Q9Y4C8 960 aaKnown RBP13.48□□□□□ -0.25
PRAMEF2-201ENST00000240189 COL24A1Q17RW2 1714 aa13.48□□□□□ -0.25
PRAMEF2-201ENST00000240189 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
PRAMEF2-201ENST00000240189 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
PRAMEF2-201ENST00000240189 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
PRAMEF2-201ENST00000240189 MORC1Q86VD1 984 aa13.46□□□□□ -0.25
PRAMEF2-201ENST00000240189 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.25
PRAMEF2-201ENST00000240189 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
PRAMEF2-201ENST00000240189 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
PRAMEF2-201ENST00000240189 PIGBQ92521 554 aa13.46□□□□□ -0.26
PRAMEF2-201ENST00000240189 IGSF1Q8N6C5 1336 aa13.45□□□□□ -0.26
PRAMEF2-201ENST00000240189 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
PRAMEF2-201ENST00000240189 CAPN15O75808 1086 aa13.44□□□□□ -0.26
PRAMEF2-201ENST00000240189 AEBP1Q8IUX7 1158 aa13.44□□□□□ -0.26
PRAMEF2-201ENST00000240189 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
PRAMEF2-201ENST00000240189 SMARCC1Q92922 1105 aaPredicted RBP13.44□□□□□ -0.26
PRAMEF2-201ENST00000240189 SYT17Q9BSW7 474 aa13.44□□□□□ -0.26
PRAMEF2-201ENST00000240189 PHKG2P15735 406 aa13.43□□□□□ -0.26
PRAMEF2-201ENST00000240189 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
PRAMEF2-201ENST00000240189 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
PRAMEF2-201ENST00000240189 COL23A1Q86Y22 540 aaPredicted RBP13.43□□□□□ -0.26
PRAMEF2-201ENST00000240189 ARXQ96QS3 562 aa13.43□□□□□ -0.26
PRAMEF2-201ENST00000240189 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
PRAMEF2-201ENST00000240189 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
PRAMEF2-201ENST00000240189 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
PRAMEF2-201ENST00000240189 UTRNP46939 3433 aa13.42□□□□□ -0.26
PRAMEF2-201ENST00000240189 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
PRAMEF2-201ENST00000240189 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
PRAMEF2-201ENST00000240189 MAP3K5Q99683 1374 aa13.42□□□□□ -0.26
PRAMEF2-201ENST00000240189 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
PRAMEF2-201ENST00000240189 PLEKHO1Q53GL0 409 aaPredicted RBP13.4□□□□□ -0.26
PRAMEF2-201ENST00000240189 VIRMAQ69YN4 1812 aaKnown RBP13.4□□□□□ -0.26
PRAMEF2-201ENST00000240189 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 YY1P25490 414 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 POLD1P28340 1107 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 IL13P35225 146 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 ITPK1Q13572 414 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 SULT6B1Q6IMI4 303 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 LINC00116Q8NCU8 138 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
PRAMEF2-201ENST00000240189 KDM6AO15550 1401 aaPredicted RBP13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 KDRP35968 1356 aa13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 ZNF831Q5JPB2 1677 aa13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 PHF14O94880 888 aa13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 MTHFSP49914 203 aa13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 B4GALNT3Q6L9W6 998 aa13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
PRAMEF2-201ENST00000240189 GOLGB1Q14789 3259 aaKnown RBP13.37□□□□□ -0.27
PRAMEF2-201ENST00000240189 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
PRAMEF2-201ENST00000240189 SIK1P57059 783 aa13.37□□□□□ -0.27
PRAMEF2-201ENST00000240189 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
PRAMEF2-201ENST00000240189 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
PRAMEF2-201ENST00000240189 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
PRAMEF2-201ENST00000240189 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
PRAMEF2-201ENST00000240189 SCN11AQ9UI33 1791 aa13.36□□□□□ -0.27
PRAMEF2-201ENST00000240189 HMOX1P09601 288 aa13.35□□□□□ -0.27
PRAMEF2-201ENST00000240189 AK7Q96M32 723 aa13.35□□□□□ -0.27
PRAMEF2-201ENST00000240189 CHD4Q14839 1912 aa13.35□□□□□ -0.27
PRAMEF2-201ENST00000240189 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
PRAMEF2-201ENST00000240189 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
PRAMEF2-201ENST00000240189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
PRAMEF2-201ENST00000240189 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
PRAMEF2-201ENST00000240189 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
PRAMEF2-201ENST00000240189 C1orf141Q5JVX7 400 aa13.33□□□□□ -0.28
PRAMEF2-201ENST00000240189 SSFA2P28290 1259 aa13.32□□□□□ -0.28
PRAMEF2-201ENST00000240189 CCDC136Q96JN2 1154 aa13.32□□□□□ -0.28
PRAMEF2-201ENST00000240189 GNPATO15228 680 aa13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 CABP4P57796 275 aa13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 TJP1Q07157 1748 aa13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 RRP1P56182 461 aaKnown RBP13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 GPR162Q16538 588 aa13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 COL3A1P02461 1466 aaPredicted RBP13.31□□□□□ -0.28
PRAMEF2-201ENST00000240189 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
PRAMEF2-201ENST00000240189 WWC3Q9ULE0 1092 aa13.3□□□□□ -0.28
PRAMEF2-201ENST00000240189 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
PRAMEF2-201ENST00000240189 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
PRAMEF2-201ENST00000240189 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRAMEF2-201ENST00000240189 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
PRAMEF2-201ENST00000240189 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
PRAMEF2-201ENST00000240189 ADAMTS7Q9UKP4 1686 aa13.29□□□□□ -0.28
PRAMEF2-201ENST00000240189 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms