RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 GPBP1L1Q9HC44 474 aaPredicted RBP10.19□□□□□ -0.78
CCL13-201ENST00000225844 ATP10DQ9P241 1426 aa10.18□□□□□ -0.78
CCL13-201ENST00000225844 ERBB3P21860 1342 aa10.18□□□□□ -0.78
CCL13-201ENST00000225844 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
CCL13-201ENST00000225844 CCER2I3L3R5 266 aa10.18□□□□□ -0.78
CCL13-201ENST00000225844 DIAPH1O60610 1272 aaKnown RBP10.18□□□□□ -0.78
CCL13-201ENST00000225844 IL2RBP14784 551 aa10.18□□□□□ -0.78
CCL13-201ENST00000225844 YBX3P16989 372 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCL13-201ENST00000225844 EMILIN1Q9Y6C2 1016 aa10.18□□□□□ -0.78
CCL13-201ENST00000225844 PPM1GO15355 546 aaPredicted RBP10.17□□□□□ -0.78
CCL13-201ENST00000225844 HSPA6P17066 643 aa10.17□□□□□ -0.78
CCL13-201ENST00000225844 KCNQ4P56696 695 aa10.17□□□□□ -0.78
CCL13-201ENST00000225844 HSP90AB2PQ58FF8 381 aa10.17□□□□□ -0.78
CCL13-201ENST00000225844 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
CCL13-201ENST00000225844 SYTL4Q96C24 671 aaPredicted RBP10.17□□□□□ -0.78
CCL13-201ENST00000225844 DDX54Q8TDD1 881 aaKnown RBP10.16□□□□□ -0.78
CCL13-201ENST00000225844 ANKRD24Q8TF21 1146 aa10.16□□□□□ -0.78
CCL13-201ENST00000225844 SHANK3Q9BYB0 1731 aa10.16□□□□□ -0.78
CCL13-201ENST00000225844 PAPPAQ13219 1627 aa10.15□□□□□ -0.78
CCL13-201ENST00000225844 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
CCL13-201ENST00000225844 HAX1O00165 279 aa10.15□□□□□ -0.78
CCL13-201ENST00000225844 IL13P35225 146 aa10.15□□□□□ -0.78
CCL13-201ENST00000225844 MSL1Q68DK7 614 aa10.15□□□□□ -0.78
CCL13-201ENST00000225844 NHSQ6T4R5 1651 aa10.15□□□□□ -0.79
CCL13-201ENST00000225844 COL18A1P39060 1754 aa10.14□□□□□ -0.79
CCL13-201ENST00000225844 FCHSD2O94868 740 aa10.14□□□□□ -0.79
CCL13-201ENST00000225844 FBLN1P23142 703 aa10.14□□□□□ -0.79
CCL13-201ENST00000225844 EIF4A2Q14240 407 aaKnown RBP10.14□□□□□ -0.79
CCL13-201ENST00000225844 WNK3Q9BYP7 1800 aa10.14□□□□□ -0.79
CCL13-201ENST00000225844 MAP2P11137 1827 aaKnown RBP10.13□□□□□ -0.79
CCL13-201ENST00000225844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCL13-201ENST00000225844 IGSF1Q8N6C5 1336 aa10.12□□□□□ -0.79
CCL13-201ENST00000225844 NEFMP07197 916 aa10.12□□□□□ -0.79
CCL13-201ENST00000225844 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
CCL13-201ENST00000225844 CNGB1Q14028 1251 aaPredicted RBP10.12□□□□□ -0.79
CCL13-201ENST00000225844 CCNL1Q9UK58 526 aaPredicted RBP10.12□□□□□ -0.79
CCL13-201ENST00000225844 KDRP35968 1356 aa10.12□□□□□ -0.79
CCL13-201ENST00000225844 NCAPD2Q15021 1401 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 NUBP1P53384 320 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCL13-201ENST00000225844 AMOTQ4VCS5 1084 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 NBPF6Q5VWK0 638 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 COL23A1Q86Y22 540 aaPredicted RBP10.11□□□□□ -0.79
CCL13-201ENST00000225844 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 RAPGEF4Q8WZA2 1011 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 LTV1Q96GA3 475 aaPredicted RBP10.11□□□□□ -0.79
CCL13-201ENST00000225844 NBPF4Q96M43 638 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 EYA1Q99502 592 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 MRS2Q9HD23 443 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 FAM208AQ9UK61 1670 aaKnown RBP10.11□□□□□ -0.79
CCL13-201ENST00000225844 LTN1O94822 1766 aa10.11□□□□□ -0.79
CCL13-201ENST00000225844 NGEFQ8N5V2 710 aa10.1□□□□□ -0.79
CCL13-201ENST00000225844 PNISRQ8TF01 805 aaKnown RBP10.1□□□□□ -0.79
CCL13-201ENST00000225844 COL3A1P02461 1466 aaPredicted RBP10.1□□□□□ -0.79
CCL13-201ENST00000225844 BTAF1O14981 1849 aa10.1□□□□□ -0.79
CCL13-201ENST00000225844 U2AF1L5P0DN76 240 aaPredicted RBP10.09□□□□□ -0.79
CCL13-201ENST00000225844 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
CCL13-201ENST00000225844 TATP17735 454 aaPredicted RBP10.09□□□□□ -0.79
CCL13-201ENST00000225844 U2AF1Q01081 240 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCL13-201ENST00000225844 CD2APQ9Y5K6 639 aa10.09□□□□□ -0.79
CCL13-201ENST00000225844 U2SURPO15042 1029 aaKnown RBP10.08□□□□□ -0.8
CCL13-201ENST00000225844 SULT6B1Q6IMI4 303 aa10.08□□□□□ -0.8
CCL13-201ENST00000225844 SPG7Q9UQ90 795 aa10.08□□□□□ -0.8
CCL13-201ENST00000225844 ADCY9O60503 1353 aa10.08□□□□□ -0.8
CCL13-201ENST00000225844 RGPD5Q99666 1765 aa10.07□□□□□ -0.8
CCL13-201ENST00000225844 APLP1P51693 650 aa10.07□□□□□ -0.8
CCL13-201ENST00000225844 PLEKHO1Q53GL0 409 aaPredicted RBP10.07□□□□□ -0.8
CCL13-201ENST00000225844 KIF3CO14782 793 aa10.06□□□□□ -0.8
CCL13-201ENST00000225844 HSP90AB1P08238 724 aaKnown RBP10.06□□□□□ -0.8
CCL13-201ENST00000225844 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
CCL13-201ENST00000225844 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
CCL13-201ENST00000225844 HTATSF1O43719 755 aaKnown RBP10.05□□□□□ -0.8
CCL13-201ENST00000225844 FLAD1Q8NFF5 587 aa10.05□□□□□ -0.8
CCL13-201ENST00000225844 GAS2L2Q8NHY3 880 aa10.05□□□□□ -0.8
CCL13-201ENST00000225844 RUNDC1Q96C34 613 aa10.05□□□□□ -0.8
CCL13-201ENST00000225844 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
CCL13-201ENST00000225844 ADAMTS8Q9UP79 889 aa10.05□□□□□ -0.8
CCL13-201ENST00000225844 KAT6BQ8WYB5 2073 aa10.05□□□□□ -0.8
CCL13-201ENST00000225844 MAPK8IP3Q9UPT6 1336 aa10.05□□□□□ -0.8
CCL13-201ENST00000225844 PHF14O94880 888 aa10.04□□□□□ -0.8
CCL13-201ENST00000225844 AK7Q96M32 723 aa10.04□□□□□ -0.8
CCL13-201ENST00000225844 PLEKHF1Q96S99 279 aa10.04□□□□□ -0.8
CCL13-201ENST00000225844 TSPYL2Q9H2G4 693 aaPredicted RBP10.04□□□□□ -0.8
CCL13-201ENST00000225844 PCDH11XQ9BZA7 1347 aa10.04□□□□□ -0.8
CCL13-201ENST00000225844 PCDH11YQ9BZA8 1340 aa10.04□□□□□ -0.8
CCL13-201ENST00000225844 HMGB2P26583 209 aaKnown RBP10.03□□□□□ -0.8
CCL13-201ENST00000225844 PRKAR2BP31323 418 aa10.03□□□□□ -0.8
CCL13-201ENST00000225844 LMOD3Q0VAK6 560 aa10.03□□□□□ -0.8
CCL13-201ENST00000225844 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
CCL13-201ENST00000225844 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
CCL13-201ENST00000225844 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.8
CCL13-201ENST00000225844 TOMM70O94826 608 aa10.02□□□□□ -0.81
CCL13-201ENST00000225844 HMOX1P09601 288 aa10.02□□□□□ -0.81
CCL13-201ENST00000225844 CCDC184Q52MB2 194 aa10.02□□□□□ -0.81
CCL13-201ENST00000225844 AKAP4Q5JQC9 854 aa10.02□□□□□ -0.81
CCL13-201ENST00000225844 COL24A1Q17RW2 1714 aa10.02□□□□□ -0.81
CCL13-201ENST00000225844 C1orf141Q5JVX7 400 aa10.01□□□□□ -0.81
CCL13-201ENST00000225844 COL13A1Q5TAT6 717 aaPredicted RBP10.01□□□□□ -0.81
CCL13-201ENST00000225844 MPRIPQ6WCQ1 1025 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms