RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 IFNL2Q8IZJ0 200 aa19.34■□□□□ 0.69
PAF1-201ENST00000221265 KIF16BQ96L93 1317 aa19.34■□□□□ 0.69
PAF1-201ENST00000221265 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
PAF1-201ENST00000221265 PLEKHG2Q9H7P9 1386 aa19.33■□□□□ 0.69
PAF1-201ENST00000221265 BRPF1P55201 1214 aaPredicted RBP19.33■□□□□ 0.69
PAF1-201ENST00000221265 ZCRB1Q8TBF4 217 aaKnown RBP19.33■□□□□ 0.69
PAF1-201ENST00000221265 BABAM1Q9NWV8 329 aa19.33■□□□□ 0.69
PAF1-201ENST00000221265 NRAPQ86VF7 1730 aa19.33■□□□□ 0.68
PAF1-201ENST00000221265 KDM2BQ8NHM5 1336 aa19.33■□□□□ 0.68
PAF1-201ENST00000221265 BTBD11A6QL63 1104 aa19.32■□□□□ 0.68
PAF1-201ENST00000221265 PDE4AP27815 886 aa19.32■□□□□ 0.68
PAF1-201ENST00000221265 DZIP1LQ8IYY4 767 aaKnown RBP19.32■□□□□ 0.68
PAF1-201ENST00000221265 ANP32AP39687 249 aaKnown RBP19.31■□□□□ 0.68
PAF1-201ENST00000221265 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
PAF1-201ENST00000221265 EIF4A1P60842 406 aaKnown RBP19.3■□□□□ 0.68
PAF1-201ENST00000221265 SKAP1Q86WV1 359 aa19.3■□□□□ 0.68
PAF1-201ENST00000221265 NECTIN2Q92692 538 aa19.3■□□□□ 0.68
PAF1-201ENST00000221265 JCADQ9P266 1359 aa19.3■□□□□ 0.68
PAF1-201ENST00000221265 NFATC2IPQ8NCF5 419 aa19.29■□□□□ 0.68
PAF1-201ENST00000221265 BACH2Q9BYV9 841 aa19.29■□□□□ 0.68
PAF1-201ENST00000221265 NOP58Q9Y2X3 529 aaKnown RBP19.29■□□□□ 0.68
PAF1-201ENST00000221265 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
PAF1-201ENST00000221265 DCAF5Q96JK2 942 aa19.29■□□□□ 0.68
PAF1-201ENST00000221265 SLC52A2Q9HAB3 445 aa19.29■□□□□ 0.68
PAF1-201ENST00000221265 PCDH11XQ9BZA7 1347 aa19.29■□□□□ 0.68
PAF1-201ENST00000221265 PCDH11YQ9BZA8 1340 aa19.29■□□□□ 0.68
PAF1-201ENST00000221265 DDX54Q8TDD1 881 aaKnown RBP19.28■□□□□ 0.68
PAF1-201ENST00000221265 IPO9Q96P70 1041 aaKnown RBP19.28■□□□□ 0.68
PAF1-201ENST00000221265 WNK3Q9BYP7 1800 aa19.28■□□□□ 0.68
PAF1-201ENST00000221265 MVPQ14764 893 aaKnown RBP19.28■□□□□ 0.68
PAF1-201ENST00000221265 CENPQQ7L2Z9 268 aaPredicted RBP19.28■□□□□ 0.68
PAF1-201ENST00000221265 TMEM57Q8N5G2 664 aa19.28■□□□□ 0.68
PAF1-201ENST00000221265 NWD2Q9ULI1 1742 aa19.27■□□□□ 0.68
PAF1-201ENST00000221265 DISP2A7MBM2 1401 aa19.27■□□□□ 0.68
PAF1-201ENST00000221265 SLC39A6Q13433 755 aa19.27■□□□□ 0.68
PAF1-201ENST00000221265 MRC1P22897 1456 aa19.26■□□□□ 0.67
PAF1-201ENST00000221265 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
PAF1-201ENST00000221265 HSPA1LP34931 641 aa19.26■□□□□ 0.67
PAF1-201ENST00000221265 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
PAF1-201ENST00000221265 SLIT2O94813 1529 aa19.26■□□□□ 0.67
PAF1-201ENST00000221265 KAT6BQ8WYB5 2073 aa19.26■□□□□ 0.67
PAF1-201ENST00000221265 G2E3Q7L622 706 aa19.26■□□□□ 0.67
PAF1-201ENST00000221265 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
PAF1-201ENST00000221265 ARHGAP45Q92619 1136 aa19.25■□□□□ 0.67
PAF1-201ENST00000221265 LRP6O75581 1613 aa19.25■□□□□ 0.67
PAF1-201ENST00000221265 HSP90AB1P08238 724 aaKnown RBP19.24■□□□□ 0.67
PAF1-201ENST00000221265 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
PAF1-201ENST00000221265 C8orf37Q96NL8 207 aa19.24■□□□□ 0.67
PAF1-201ENST00000221265 TOGARAM1Q9Y4F4 1720 aa19.24■□□□□ 0.67
PAF1-201ENST00000221265 RGS12O14924 1447 aa19.24■□□□□ 0.67
PAF1-201ENST00000221265 SPATA31A1Q5TZJ5 1347 aa19.23■□□□□ 0.67
PAF1-201ENST00000221265 EIF2S2P20042 333 aaKnown RBP19.23■□□□□ 0.67
PAF1-201ENST00000221265 HDGFL1Q5TGJ6 251 aa19.23■□□□□ 0.67
PAF1-201ENST00000221265 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
PAF1-201ENST00000221265 HEG1Q9ULI3 1381 aa19.22■□□□□ 0.67
PAF1-201ENST00000221265 ABCC4O15439 1325 aa19.22■□□□□ 0.67
PAF1-201ENST00000221265 CABP4P57796 275 aa19.22■□□□□ 0.67
PAF1-201ENST00000221265 NKX1-1Q15270 411 aaPredicted RBP19.22■□□□□ 0.67
PAF1-201ENST00000221265 CCDC30Q5VVM6 783 aa19.22■□□□□ 0.67
PAF1-201ENST00000221265 C5P01031 1676 aa19.21■□□□□ 0.67
PAF1-201ENST00000221265 GIGYF1O75420 1035 aaPredicted RBP19.21■□□□□ 0.67
PAF1-201ENST00000221265 NGLY1Q96IV0 654 aa19.21■□□□□ 0.67
PAF1-201ENST00000221265 STK31Q9BXU1 1019 aa19.21■□□□□ 0.67
PAF1-201ENST00000221265 SOS1Q07889 1333 aaPredicted RBP19.2■□□□□ 0.66
PAF1-201ENST00000221265 API5Q9BZZ5 524 aaKnown RBP19.2■□□□□ 0.66
PAF1-201ENST00000221265 PCDHB15Q9Y5E8 787 aa19.2■□□□□ 0.66
PAF1-201ENST00000221265 SPATA31A5Q5VU36 1347 aa19.2■□□□□ 0.66
PAF1-201ENST00000221265 SPATA31A7Q8IWB4 1347 aa19.2■□□□□ 0.66
PAF1-201ENST00000221265 BCL9LQ86UU0 1499 aa19.19■□□□□ 0.66
PAF1-201ENST00000221265 NPM2Q86SE8 214 aaKnown RBP19.19■□□□□ 0.66
PAF1-201ENST00000221265 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
PAF1-201ENST00000221265 CCDC9Q9Y3X0 531 aaKnown RBP19.19■□□□□ 0.66
PAF1-201ENST00000221265 HOXB7P09629 217 aa19.18■□□□□ 0.66
PAF1-201ENST00000221265 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
PAF1-201ENST00000221265 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
PAF1-201ENST00000221265 PTPRCP08575 1304 aa19.18■□□□□ 0.66
PAF1-201ENST00000221265 SPATA31A6Q5VVP1 1343 aa19.18■□□□□ 0.66
PAF1-201ENST00000221265 ITGB4P16144 1822 aa19.18■□□□□ 0.66
PAF1-201ENST00000221265 ANXA1P04083 346 aa19.18■□□□□ 0.66
PAF1-201ENST00000221265 UNC5CLQ8IV45 518 aa19.18■□□□□ 0.66
PAF1-201ENST00000221265 CHPF2Q9P2E5 772 aa19.18■□□□□ 0.66
PAF1-201ENST00000221265 ERVV-2B6SEH9 535 aa19.17■□□□□ 0.66
PAF1-201ENST00000221265 F6X3S4 739 aa19.17■□□□□ 0.66
PAF1-201ENST00000221265 IGHDP01880 384 aa19.17■□□□□ 0.66
PAF1-201ENST00000221265 FLIIQ13045 1269 aa19.17■□□□□ 0.66
PAF1-201ENST00000221265 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
PAF1-201ENST00000221265 GLI3P10071 1580 aa19.17■□□□□ 0.66
PAF1-201ENST00000221265 EXOC5O00471 708 aa19.16■□□□□ 0.66
PAF1-201ENST00000221265 ZBTB40Q9NUA8 1239 aa19.16■□□□□ 0.66
PAF1-201ENST00000221265 TNS2Q63HR2 1409 aa19.15■□□□□ 0.66
PAF1-201ENST00000221265 UBR2Q8IWV8 1755 aa19.15■□□□□ 0.66
PAF1-201ENST00000221265 PAPPAQ13219 1627 aa19.15■□□□□ 0.66
PAF1-201ENST00000221265 ZBTB7BO15156 539 aaPredicted RBP19.15■□□□□ 0.66
PAF1-201ENST00000221265 PROSER3Q2NL68 480 aa19.15■□□□□ 0.66
PAF1-201ENST00000221265 TTC5Q8N0Z6 440 aa19.15■□□□□ 0.66
PAF1-201ENST00000221265 FNBP4Q8N3X1 1017 aaPredicted RBP19.15■□□□□ 0.66
PAF1-201ENST00000221265 THRAP3Q9Y2W1 955 aaKnown RBP19.15■□□□□ 0.66
PAF1-201ENST00000221265 FKBP5Q13451 457 aaPredicted RBP19.13■□□□□ 0.65
PAF1-201ENST00000221265 AAMPQ13685 434 aa19.13■□□□□ 0.65
PAF1-201ENST00000221265 INTS3Q68E01 1043 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms