RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 NUTM2AQ8IVF1 878 aaPredicted RBP14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 CEP131Q9UPN4 1083 aa14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 TCHPQ9BT92 498 aa14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 SLU7O95391 586 aaKnown RBP14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 WHAMMQ8TF30 809 aa14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 WASF1Q92558 559 aa14.37□□□□□ -0.11
HS3ST1-201ENST00000002596 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 LUZP1Q86V48 1076 aa14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 CNTLNQ9NXG0 1405 aa14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 ODF2LQ9ULJ1 636 aa14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 MICALCLQ6ZW33 695 aa14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 FBF1Q8TES7 1133 aa14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 PRPF4BQ13523 1007 aaKnown RBP14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 SIL1Q9H173 461 aa14.36□□□□□ -0.11
HS3ST1-201ENST00000002596 KIF5CO60282 957 aa14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 CCDC6Q16204 474 aa14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 C6orf163Q5TEZ5 329 aa14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 SEPT8Q92599 483 aa14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 DDX11Q96FC9 970 aa14.35□□□□□ -0.11
HS3ST1-201ENST00000002596 PRKCSHP14314 528 aaPredicted RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 PRKRIP1Q9H875 184 aaPredicted RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 EHMT1Q9H9B1 1298 aa14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 NOL3O60936 208 aaKnown RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 PROSER2Q86WR7 435 aaPredicted RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 ZBTB9Q96C00 473 aa14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 ERCC5P28715 1186 aaPredicted RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 PDE1CQ14123 709 aaPredicted RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 SPTY2D1Q68D10 685 aaPredicted RBP14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
HS3ST1-201ENST00000002596 FKBP4Q02790 459 aaKnown RBP eCLIP14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 KIF3CO14782 793 aa14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 KRT85P78386 507 aa14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 FILIP1Q7Z7B0 1213 aa14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 DDX54Q8TDD1 881 aaKnown RBP14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 EPSTI1Q96J88 318 aa14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 MAP7D1Q3KQU3 841 aa14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 DACT3Q96B18 629 aaPredicted RBP14.33□□□□□ -0.12
HS3ST1-201ENST00000002596 CASQ1P31415 396 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 MTHFSP49914 203 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 SMC1BQ8NDV3 1235 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 IL27Q8NEV9 243 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 A0A1W2PRG0 241 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 FSD2A1L4K1 749 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 HLTFQ14527 1009 aaKnown RBP eCLIP14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 VPS36Q86VN1 386 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 FGFR1OPO95684 399 aaKnown RBP14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 ARHGAP29Q52LW3 1261 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 VTI1AQ96AJ9 217 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 SRCIN1Q9C0H9 1055 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 ZPR1O75312 459 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 MPHOSPH6Q99547 160 aaKnown RBP14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 FERMT1Q9BQL6 677 aa14.32□□□□□ -0.12
HS3ST1-201ENST00000002596 MYOM3Q5VTT5 1437 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 SEPT14Q6ZU15 432 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 PFDN4Q9NQP4 134 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 SPATA32Q96LK8 384 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 CCDC7Q96M83 1385 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 IKBKGQ9Y6K9 419 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 PPP1R12AO14974 1030 aaPredicted RBP14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 PDIA4P13667 645 aaKnown RBP14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 FAM114A1Q8IWE2 563 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 CRACR2BQ8N4Y2 399 aaPredicted RBP14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 TSG101Q99816 390 aa14.31□□□□□ -0.12
HS3ST1-201ENST00000002596 MYL6BP14649 208 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 RFC1P35251 1148 aaPredicted RBP14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 PIP4K2BP78356 416 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 CUL5Q93034 780 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 UPF3BQ9BZI7 483 aaKnown RBP14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 MMRN2Q9H8L6 949 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 STARD3NLO95772 234 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 CACNA2D4Q7Z3S7 1137 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 GRPEL1Q9HAV7 217 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 CFAP100Q494V2 611 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 SPA17Q15506 151 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 HDGFL1Q5TGJ6 251 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 KLHL10Q6JEL2 608 aa14.3□□□□□ -0.12
HS3ST1-201ENST00000002596 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 UBXN4Q92575 508 aa14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 SIRT1Q96EB6 747 aa14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 CWC25Q9NXE8 425 aaPredicted RBP14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 SMTNL1A8MU46 457 aa14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 SUPT6HQ7KZ85 1726 aaKnown RBP14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 SLF2Q8IX21 1173 aa14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 ARID4AP29374 1257 aaPredicted RBP14.29□□□□□ -0.12
HS3ST1-201ENST00000002596 PDCL2Q8N4E4 241 aa14.28□□□□□ -0.12
HS3ST1-201ENST00000002596 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
HS3ST1-201ENST00000002596 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms