RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Efcab2Q9CQ46 164 aa24.33■■□□□ 1.49
Scn1b-203ENSMUST00000211945 Erbb3Q61526 1339 aa24.33■■□□□ 1.49
Scn1b-203ENSMUST00000211945 CastP51125 788 aa24.32■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Klc3Q91W40 508 aa24.32■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Atf5O70191 283 aa24.31■■□□□ 1.48
Scn1b-203ENSMUST00000211945 U2surpQ6NV83 1029 aaKnown RBP24.31■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Jmjd4Q8BFT6 427 aa24.31■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Adcy9P51830 1353 aa24.31■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Msh6P54276 1358 aaKnown RBP24.3■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Kndc1Q0KK55 1742 aa24.3■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Iqsec3Q3TES0 1195 aa24.3■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Dcaf5Q80T85 946 aa24.3■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Cap2Q9CYT6 476 aa24.3■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Znf710Q3U288 666 aa24.3■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Kank1E9Q238 1360 aa24.29■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Ccar1Q8CH18 1146 aaKnown RBP24.28■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Ttc41Q692V3 1318 aa24.27■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Vamp4O70480 141 aa24.27■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Ric1Q69ZJ7 1422 aa24.27■■□□□ 1.48
Scn1b-203ENSMUST00000211945 Senp3Q9EP97 568 aaKnown RBP24.26■■□□□ 1.47
Scn1b-203ENSMUST00000211945 PigbQ9JJQ0 542 aa24.26■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Hmgb2P30681 210 aaKnown RBP24.25■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Smg7Q5RJH6 1138 aaKnown RBP24.25■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Mylk2Q8VCR8 613 aa24.25■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Taf7Q9R1C0 341 aa24.25■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Pibf1E9Q6K3 756 aa24.25■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Chpf2Q3UU43 768 aa24.25■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Pdia6Q922R8 440 aaKnown RBP24.25■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Snapc4Q8BP86 1333 aa24.24■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Cers3Q1A3B0 383 aa24.24■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Tmem119Q8R138 280 aa24.24■■□□□ 1.47
Scn1b-203ENSMUST00000211945 GckrQ91X44 587 aa24.24■■□□□ 1.47
Scn1b-203ENSMUST00000211945 BcorQ8CGN4 1759 aa24.23■■□□□ 1.47
Scn1b-203ENSMUST00000211945 TefQ9JLC6 301 aa24.23■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Q3TQI7 289 aaKnown RBP24.22■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Plekhh1Q80TI1 1356 aa24.22■■□□□ 1.47
Scn1b-203ENSMUST00000211945 VirmaA2AIV2 1811 aaKnown RBP24.22■■□□□ 1.47
Scn1b-203ENSMUST00000211945 1700019A02RikA0A087WPV9 146 aa24.21■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Apba2P98084 750 aa24.21■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Pde4dQ01063 747 aa24.21■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Pim2Q62070 370 aa24.21■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Ccdc171E9Q1U1 1324 aa24.21■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Nav1Q8CH77 1875 aa24.21■■□□□ 1.47
Scn1b-203ENSMUST00000211945 Flad1Q8R123 492 aa24.2■■□□□ 1.47
Scn1b-203ENSMUST00000211945 CoblQ5NBX1 1337 aaKnown RBP24.19■■□□□ 1.46
Scn1b-203ENSMUST00000211945 PsapQ61207 557 aaKnown RBP24.19■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Morc2aQ69ZX6 1030 aa24.18■■□□□ 1.46
Scn1b-203ENSMUST00000211945 KarsQ99MN1 595 aaKnown RBP24.18■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Cnksr1A2A9K7 700 aa24.17■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Chl1P70232 1209 aa24.17■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Cnnm1Q0GA42 951 aa24.17■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Ankrd13dQ6PD24 605 aa24.16■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Fkbp4P30416 458 aa24.15■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Cavin2Q63918 418 aaKnown RBP24.15■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Prkab2Q6PAM0 271 aa24.15■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Irx6Q9ER75 438 aa24.15■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Tnnt1O88346 262 aa24.15■■□□□ 1.46
Scn1b-203ENSMUST00000211945 L3mbtl2P59178 703 aa24.15■■□□□ 1.46
Scn1b-203ENSMUST00000211945 Gm12185Q5NCB2 835 aa24.14■■□□□ 1.45
Scn1b-203ENSMUST00000211945 DiexfQ8BTT6 772 aaKnown RBP24.14■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Ccdc60Q8C4J0 545 aa24.14■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Bicdl1A0JNT9 577 aa24.13■■□□□ 1.45
Scn1b-203ENSMUST00000211945 SympkQ80X82 1284 aa24.13■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Syde2E9PUP1 1314 aa24.13■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Erbb4Q61527 1308 aa24.12■■□□□ 1.45
Scn1b-203ENSMUST00000211945 C4bP01029 1738 aa24.12■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Gm6268A2A3U9 297 aa24.11■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Miga2Q8BK03 593 aa24.11■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Trim26Q99PN3 545 aa24.11■■□□□ 1.45
Scn1b-203ENSMUST00000211945 MetP16056 1379 aa24.11■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Plekhm2Q80TQ5 1018 aa24.1■■□□□ 1.45
Scn1b-203ENSMUST00000211945 G3bp1P97855 465 aaKnown RBP24.1■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Ezh2Q61188 746 aaKnown RBP24.1■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Q8BT18 775 aa24.1■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Col4a1P02463 1669 aa24.09■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Gm13023A2A8N2 498 aa24.09■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Upf2A2AT37 1269 aaKnown RBP24.09■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Bcl2l13P59017 434 aa24.09■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Gigyf1Q99MR1 1044 aaKnown RBP24.09■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Smarcc1P97496 1104 aa24.08■■□□□ 1.45
Scn1b-203ENSMUST00000211945 CoilQ5SU73 570 aa24.08■■□□□ 1.45
Scn1b-203ENSMUST00000211945 Clcn1Q64347 994 aa24.06■■□□□ 1.44
Scn1b-203ENSMUST00000211945 MarsQ68FL6 902 aaKnown RBP24.06■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Trim52Q8CDV4 233 aa24.06■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Slc39a6Q8C145 765 aa24.05■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Polr3glQ8R0C0 218 aa24.05■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Sv2bQ8BG39 683 aa24.04■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Zbtb1Q91VL9 713 aa24.03■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Prr29B1ARI9 187 aa24.02■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Igfbp6P47880 238 aa24.02■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Fam198bQ3UPI1 517 aa24.02■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Lrrc43Q3V0L5 667 aa24.02■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Nip7Q9CXK8 180 aaKnown RBP24.02■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Akt1s1Q9D1F4 257 aa24.02■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Zfyve9A2A8R0 1397 aa24.02■■□□□ 1.44
Scn1b-203ENSMUST00000211945 Fam83gQ5SWY7 812 aa24.01■■□□□ 1.43
Scn1b-203ENSMUST00000211945 Eif5bQ05D44 1216 aaKnown RBP24■■□□□ 1.43
Scn1b-203ENSMUST00000211945 Ubr3Q5U430 1889 aa24■■□□□ 1.43
Scn1b-203ENSMUST00000211945 Ddx60E9PZQ1 1711 aa24■■□□□ 1.43
Scn1b-203ENSMUST00000211945 Cyp2d11P24457 504 aa24■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms