RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Znf423Q80TS5 1292 aa12.81□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Scaf11E9PZM7 1456 aaKnown RBP12.81□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Ssh1Q76I79 1042 aa12.81□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Chtf18Q8BIW9 969 aa12.81□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Depdc5P61460 1591 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Myo5cE9Q1F5 1742 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 MsmpB1AWI6 139 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Rbm25B2RY56 838 aaKnown RBP12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Myo1bP46735 1107 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Iqgap3F8VQ29 1632 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Abca8aQ8K442 1620 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Ttc37F8VPK0 1563 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Tmem131lQ3U3D7 1597 aa12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Med14A2ABV5 1459 aaKnown RBP12.8□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Myo3aQ8K3H5 1613 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Catsper2A2ARP9 588 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Armc3A2AU72 881 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Cald1E9QA15 768 aaKnown RBP12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Rnf166Q3U9F6 237 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Rsph3aQ3UFY4 516 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Ddrgk1Q80WW9 315 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 KnstrnQ9D9Z1 312 aaKnown RBP12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Hecw2Q6I6G8 1578 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 InsrP15208 1372 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Cdk5rap2Q8K389 1822 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Ankrd33bQ3U0L2 486 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Jph1Q9ET80 660 aa12.79□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Trpm1Q2TV84 1622 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Znf541Q0GGX2 1363 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Plxnc1Q9QZC2 1574 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Ksr2Q3UVC0 959 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Dbn1Q9QXS6 706 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 DmtnQ9WV69 405 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Sipa1l1Q8C0T5 1782 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 MaddQ80U28 1577 aa12.78□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Ttc21bQ0HA38 1315 aa12.77□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Gm10093D3YYI8 482 aa12.77□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Erich6D3Z6S9 713 aa12.77□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Hdac1O09106 482 aaKnown RBP12.77□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Ino80Q6ZPV2 1559 aa12.77□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Xrn1P97789 1719 aaKnown RBP12.77□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Map3k5O35099 1380 aa12.77□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Efcab6Q6P1E8 1516 aa12.77□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Skint5A7XUY5 1461 aa12.77□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Abca9Q8K449 1623 aa12.77□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Kidins220E9Q9B7 1793 aa12.77□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Mfap1aC0HKD8 439 aaKnown RBP12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Mfap1bC0HKD9 439 aaKnown RBP12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Kif2cQ922S8 721 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Atp10dQ8K2X1 1416 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 PtpreP49446 699 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Wwc1Q5SXA9 1104 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 SkilQ60665 675 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Eml3Q8VC03 897 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Atxn3Q9CVD2 355 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Limd1Q9QXD8 668 aa12.76□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Ccdc171E9Q1U1 1324 aa12.75□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Sall3Q62255 1320 aa12.75□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 March10E9PX79 788 aa12.75□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Tpm2P58774 284 aa12.75□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Chmp4bQ9D8B3 224 aaKnown RBP12.75□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Trim44Q9QXA7 346 aa12.75□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Nos1Q9Z0J4 1429 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Adgrb3Q80ZF8 1522 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Nkx2-3P97334 362 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Fan1Q69ZT1 1020 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Kdm4cQ8VCD7 1054 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Kif18aQ91WD7 886 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Armcx1Q9CX83 456 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Fndc1E9Q043 1732 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 AdgbG3UZ78 1657 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 FanciQ8K368 1330 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Paxip1Q6NZQ4 1056 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Cetn4Q8K4K1 168 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 ScaperF8VQ70 1398 aaKnown RBP12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 AatkQ80YE4 1365 aa12.74□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Cdc42bpgQ80UW5 1551 aa12.73□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 PaskQ8CEE6 1383 aa12.73□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Il4rP16382 810 aa12.73□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Rtn1Q8K0T0 780 aa12.73□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Hhipl2Q9D2G9 717 aa12.73□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Znf518aB2RRF6 1478 aaKnown RBP12.72□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Plcb2A3KGF7 1181 aa12.72□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 P2rx7Q9Z1M0 595 aa12.72□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Uhrf1bp1B2KF50 1429 aa12.72□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Brd1E9PZ26 1189 aaKnown RBP12.71□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Puf60Q3UEB3 564 aaKnown RBP12.71□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Tex2Q6ZPJ0 1128 aaKnown RBP12.71□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Polr3glQ8R0C0 218 aa12.71□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Nubp1Q9R060 320 aa12.71□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 PalldQ9ET54 1408 aa12.71□□□□□ -0.37
Pdlim5-204ENSMUST00000168967 Ddit3P35639 168 aa12.71□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 CastP51125 788 aa12.71□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 Cops2P61202 443 aaKnown RBP12.71□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 Foxj1Q61660 421 aa12.71□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 Pdcl2Q78Y63 240 aa12.71□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 Creld1Q91XD7 420 aa12.71□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 Ehbp1l1Q99MS7 1716 aa12.71□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 Ttc21aQ8C0S4 1314 aa12.7□□□□□ -0.38
Pdlim5-204ENSMUST00000168967 Tecpr2Q3UH45 1423 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms