RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Cep112Q5PR68 954 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Trim29Q8R2Q0 587 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 ApobrQ8VBT6 942 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 ZwintQ9CQU5 252 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Nsfl1cQ9CZ44 370 aaKnown RBP13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Odf2lQ9D478 642 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Bicdl1A0JNT9 577 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Map4k4P97820 1233 aaKnown RBP13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Cfap73J3QPZ5 306 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Serpinb6bO08804 377 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 HmmrQ00547 794 aaKnown RBP13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Gys2Q8VCB3 704 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 InsrP15208 1372 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 A0A1L1SQF0 893 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Abcd1P48410 736 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 4930572O03RikQ8C5Y0 211 aa13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Rrs1Q9CYH6 365 aaKnown RBP13.69□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Ccdc155Q80VJ8 648 aa13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Wdr33Q8K4P0 1330 aaKnown RBP13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Trim34aQ99PP6 485 aa13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Strn4P58404 760 aa13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Mcm6P97311 821 aa13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Ano6Q6P9J9 911 aa13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Bms1Q6PGF5 1284 aaKnown RBP13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Zeb2Q9R0G7 1215 aa13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 UvssaQ9D479 717 aa13.68□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Wdr62Q3U3T8 1523 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Zbtb45Q52KG4 520 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 SynmQ70IV5 1561 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Crocc2F6XLV1 1638 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Ankrd44B2RXR6 993 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Zfp91Q62511 572 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Naa30Q8CES0 364 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Mrps25Q9D125 171 aaKnown RBP13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Tex19.1Q99MV2 351 aa13.67□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Hand2Q61039 217 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Trim27Q62158 513 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Necab1Q8BG18 352 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Mapk8ip1Q9WVI9 707 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Fam83gQ5SWY7 812 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Exoc8Q6PGF7 716 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Znf653Q6YND2 615 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Fsd2Q8BZ52 692 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Rprd2Q6NXI6 1469 aaKnown RBP13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 BbxQ8VBW5 907 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 MicalclQ9D5U9 680 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Pdia3P27773 505 aaKnown RBP13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Usp25P57080 1055 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 VeztQ3ZK22 780 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 CtcfQ61164 736 aaKnown RBP13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Tmx3Q8BXZ1 456 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Znf131Q8K3J5 619 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 OptnQ8K3K8 584 aa13.66□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Tnni2P13412 182 aa13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Gm10093D3YYI8 482 aa13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Hdac1O09106 482 aaKnown RBP13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Smc2Q8CG48 1191 aaKnown RBP13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Rbm19Q8R3C6 952 aaKnown RBP13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Fkbp5Q64378 456 aa13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Fam170aQ66LM6 333 aa13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Flad1Q8R123 492 aa13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Atp10dQ8K2X1 1416 aa13.65□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Brd1E9PZ26 1189 aaKnown RBP13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Cep135Q6P5D4 1140 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Nat10Q8K224 1024 aaKnown RBP13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Stxbp4Q9WV89 557 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Plekhd1B2RPU2 505 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Trim34bJ3QNR8 485 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ehmt1Q5DW34 1296 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Maats1Q8BRC6 783 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Luzp1Q8R4U7 1068 aaKnown RBP13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ddx27Q921N6 760 aaKnown RBP13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 CenpqQ9CPQ5 267 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 NgdnQ9DB96 315 aaKnown RBP13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Prl7d1P04769 244 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Eif3bQ8JZQ9 803 aaKnown RBP13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Rapgef4Q9EQZ6 1011 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ppp1r15aP17564 657 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 U2af2P26369 475 aaKnown RBP13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Dmrt2Q8BG36 561 aa13.64□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ube2hP62257 183 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Commd10Q8JZY2 202 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Zap70P43404 618 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Zswim4Q8C7B8 1101 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Iqca1Q9CUL5 857 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Sel1lQ9Z2G6 790 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Ddx58Q6Q899 926 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Tmem67Q8BR76 992 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Asxl1P59598 1514 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Zscan29E9Q5B4 869 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Gjc1P28229 396 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Tango6Q8C3S2 1079 aa13.63□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Paxbp1P58501 919 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Kiaa0753Q6A000 959 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Snw1Q9CSN1 536 aaKnown RBP13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Cnpy2Q9QXT0 182 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Polr3aB2RXC6 1390 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Gm1043A0A140LJC2 1431 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Pde4bB1AWC9 736 aa13.62□□□□□ -0.23
Ndc1-204ENSMUST00000139560 Gng11P61953 73 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms