RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Eya1P97767 591 aa12.92□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Pak3Q61036 559 aa12.92□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Usp19Q3UJD6 1360 aa12.92□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Kat6bQ8BRB7 1872 aa12.92□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Gm38655A0A286YDK6 273 aa12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 GapdhsQ64467 440 aa12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Kdm6aO70546 1401 aa12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 InhbeO08717 350 aa12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Sf3b2Q3UJB0 878 aaKnown RBP12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Fchsd2Q3USJ8 740 aa12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Tcerg1Q8CGF7 1100 aaKnown RBP12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Plin1Q8CGN5 517 aa12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Golga2Q921M4 999 aa12.91□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Col15a1O35206 1367 aa12.9□□□□□ -0.34
Tpm1-213ENSMUST00000113697 TkfcQ8VC30 578 aa12.9□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Slit1Q80TR4 1531 aa12.9□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Arfgef2A2A5R2 1792 aa12.9□□□□□ -0.34
Tpm1-213ENSMUST00000113697 Gm10471E9Q1C7 252 aa12.89□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Ccdc129Q14B48 1034 aa12.89□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Zranb3Q6NZP1 1069 aa12.89□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Zeb2Q9R0G7 1215 aa12.89□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Mbd3Q9Z2D8 285 aaKnown RBP12.89□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Ttc41Q692V3 1318 aa12.89□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Shank2Q80Z38 1476 aa12.89□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Plekhd1B2RPU2 505 aa12.88□□□□□ -0.35
Tpm1-213ENSMUST00000113697 NeflP08551 543 aa12.88□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Trpm3Q5F4S9 1721 aa12.88□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Mcm10Q0VBD2 885 aa12.88□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Uspl1Q3ULM6 1089 aa12.88□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Zpr1Q62384 459 aa12.88□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Sgsm1Q8BPQ7 1093 aa12.88□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Tnrc6cQ3UHC0 1690 aaKnown RBP12.87□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Akap11E9Q777 1895 aa12.87□□□□□ -0.35
Tpm1-213ENSMUST00000113697 ZyxQ62523 564 aa12.87□□□□□ -0.35
Tpm1-213ENSMUST00000113697 L3mbtl2P59178 703 aa12.86□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Zfp444Q3TDV8 331 aaKnown RBP12.86□□□□□ -0.35
Tpm1-213ENSMUST00000113697 4930567H17RikQ3V0K5 233 aa12.86□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Ahnak2E9PYB0 1738 aaKnown RBP12.86□□□□□ -0.35
Tpm1-213ENSMUST00000113697 TnikP83510 1323 aa12.86□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Tnks1bp1P58871 1720 aa12.85□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Q4VA45 678 aa12.85□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Uhrf1bp1B2KF50 1429 aa12.85□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Apaf1O88879 1249 aa12.85□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Mapk8ip3Q9ESN9 1337 aa12.85□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Simc1E9Q6E9 1354 aa12.84□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Fer1l6E0CZ42 1862 aa12.84□□□□□ -0.35
Tpm1-213ENSMUST00000113697 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.83□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Pm20d1Q8C165 503 aa12.83□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Cc2d1aQ8K1A6 943 aa12.83□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Cacnb1Q8R3Z5 597 aa12.83□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Myo5bP21271 1818 aa12.83□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Cacna1sQ02789 1880 aa12.83□□□□□ -0.36
Tpm1-213ENSMUST00000113697 RydenQ8CAK3 290 aaKnown RBP12.82□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Stk31Q99MW1 1018 aa12.82□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Fam50bQ9WTJ8 334 aa12.82□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Cavin4A2AMM0 362 aa12.82□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Nolc1E9Q5C9 702 aaKnown RBP12.82□□□□□ -0.36
Tpm1-213ENSMUST00000113697 CrbnQ8C7D2 445 aa12.82□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Ltbp1Q8CG19 1712 aa12.82□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Adgrb1Q3UHD1 1582 aa12.81□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Rab11fip3Q8CHD8 1047 aa12.81□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Iqcf3Q9D498 203 aa12.81□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Cabp2Q9JLK4 216 aa12.81□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Gsdma3Q5Y4Y6 464 aa12.8□□□□□ -0.36
Tpm1-213ENSMUST00000113697 ThemisQ8BGW0 636 aa12.8□□□□□ -0.36
Tpm1-213ENSMUST00000113697 HypkQ9CR41 129 aa12.8□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Mast2Q60592 1734 aa12.8□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Prim1P20664 417 aa12.79□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Ralbp1Q62172 648 aa12.79□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Prkrip1Q9CWV6 186 aaKnown RBP12.79□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Clec2iQ9WVF9 217 aa12.79□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Dusp27Q148W8 1138 aa12.78□□□□□ -0.36
Tpm1-213ENSMUST00000113697 4930572O03RikQ8C5Y0 211 aa12.78□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Speer4f1Q9D5Q6 258 aa12.78□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Nup153E9Q3G8 1462 aaKnown RBP12.78□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Plekhh1Q80TI1 1356 aa12.78□□□□□ -0.36
Tpm1-213ENSMUST00000113697 TmpoQ61033 693 aaKnown RBP12.77□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Ankrd23Q812A3 306 aa12.77□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Supt16hQ920B9 1047 aa12.77□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Speer4bQ9D9F7 267 aa12.77□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Swt1Q9DBQ9 907 aa12.77□□□□□ -0.36
Tpm1-213ENSMUST00000113697 Gm21680A0A0G2JGR8 267 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Sik1Q60670 779 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Ginm1Q91WR6 327 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Rwdd1Q9CQK7 243 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Amotl1Q9D4H4 968 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Nwd2Q6P5U7 1742 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 AampJ3QN89 436 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Rnf25Q9QZR0 456 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Arih1Q9Z1K5 555 aa12.76□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Ffar3Q3UFD7 319 aa12.75□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Lrrc14bQ3UJB3 510 aa12.75□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Hic1Q9R1Y5 733 aa12.75□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Erbb3Q61526 1339 aa12.75□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Tns2Q8CGB6 1400 aa12.74□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Exoc5Q3TPX4 708 aa12.74□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Ddb1Q3U1J4 1140 aaKnown RBP12.74□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Aldh16a1Q571I9 802 aa12.74□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Abcf1Q6P542 837 aaKnown RBP12.74□□□□□ -0.37
Tpm1-213ENSMUST00000113697 Kcnh4A2A5F7 1018 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms