RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Aldh8a1Q8BH00 487 aa18.65■□□□□ 0.58
Trim11-203ENSMUST00000108810 Wdr63B2RY71 923 aa18.63■□□□□ 0.57
Trim11-203ENSMUST00000108810 Tnnt1O88346 262 aa18.63■□□□□ 0.57
Trim11-203ENSMUST00000108810 Btbd11Q6GQW0 1109 aa18.63■□□□□ 0.57
Trim11-203ENSMUST00000108810 ThemisQ8BGW0 636 aa18.63■□□□□ 0.57
Trim11-203ENSMUST00000108810 Ppp1r9bQ6R891 817 aaKnown RBP18.63■□□□□ 0.57
Trim11-203ENSMUST00000108810 Pdzd9Q9D9M4 266 aa18.62■□□□□ 0.57
Trim11-203ENSMUST00000108810 KnstrnQ9D9Z1 312 aaKnown RBP18.62■□□□□ 0.57
Trim11-203ENSMUST00000108810 Eif4g2Q62448 906 aaKnown RBP18.62■□□□□ 0.57
Trim11-203ENSMUST00000108810 Cgnl1Q6AW69 1298 aa18.62■□□□□ 0.57
Trim11-203ENSMUST00000108810 Fgd1P52734 960 aa18.61■□□□□ 0.57
Trim11-203ENSMUST00000108810 FanclQ9CR14 375 aa18.61■□□□□ 0.57
Trim11-203ENSMUST00000108810 Stk36Q69ZM6 1316 aa18.6■□□□□ 0.57
Trim11-203ENSMUST00000108810 Sart3Q9JLI8 962 aaKnown RBP18.6■□□□□ 0.57
Trim11-203ENSMUST00000108810 RgmbQ7TQ33 436 aa18.59■□□□□ 0.57
Trim11-203ENSMUST00000108810 Gcc1Q9D4H2 778 aa18.59■□□□□ 0.57
Trim11-203ENSMUST00000108810 Phkg2Q9DB30 406 aa18.59■□□□□ 0.57
Trim11-203ENSMUST00000108810 Gnai2P08752 355 aaKnown RBP18.58■□□□□ 0.57
Trim11-203ENSMUST00000108810 Tmem119Q8R138 280 aa18.58■□□□□ 0.57
Trim11-203ENSMUST00000108810 Zranb3Q6NZP1 1069 aa18.58■□□□□ 0.56
Trim11-203ENSMUST00000108810 ScaperF8VQ70 1398 aaKnown RBP18.58■□□□□ 0.56
Trim11-203ENSMUST00000108810 Mfap1aC0HKD8 439 aaKnown RBP18.57■□□□□ 0.56
Trim11-203ENSMUST00000108810 Mfap1bC0HKD9 439 aaKnown RBP18.57■□□□□ 0.56
Trim11-203ENSMUST00000108810 Ccdc27Q3V036 639 aa18.57■□□□□ 0.56
Trim11-203ENSMUST00000108810 Cadps2Q8BYR5 1297 aa18.57■□□□□ 0.56
Trim11-203ENSMUST00000108810 Kif2cQ922S8 721 aa18.57■□□□□ 0.56
Trim11-203ENSMUST00000108810 Adcy9P51830 1353 aa18.57■□□□□ 0.56
Trim11-203ENSMUST00000108810 Rabep1O35551 862 aa18.56■□□□□ 0.56
Trim11-203ENSMUST00000108810 Irx6Q9ER75 438 aa18.56■□□□□ 0.56
Trim11-203ENSMUST00000108810 Tjp1P39447 1745 aaKnown RBP18.56■□□□□ 0.56
Trim11-203ENSMUST00000108810 Echdc1Q9D9V3 322 aa18.56■□□□□ 0.56
Trim11-203ENSMUST00000108810 Flt4P35917 1363 aa18.56■□□□□ 0.56
Trim11-203ENSMUST00000108810 Atg4a-psA0A0G2JFS9 396 aa18.55■□□□□ 0.56
Trim11-203ENSMUST00000108810 Fkbp4P30416 458 aa18.55■□□□□ 0.56
Trim11-203ENSMUST00000108810 Mcm2P97310 904 aa18.55■□□□□ 0.56
Trim11-203ENSMUST00000108810 Ccdc155Q80VJ8 648 aa18.55■□□□□ 0.56
Trim11-203ENSMUST00000108810 Atg4aQ8C9S8 396 aa18.55■□□□□ 0.56
Trim11-203ENSMUST00000108810 GckrQ91X44 587 aa18.55■□□□□ 0.56
Trim11-203ENSMUST00000108810 Sptbn5F6UCX4 1208 aa18.55■□□□□ 0.56
Trim11-203ENSMUST00000108810 Cc2d1aQ8K1A6 943 aa18.54■□□□□ 0.56
Trim11-203ENSMUST00000108810 Smarca5Q91ZW3 1051 aaKnown RBP18.54■□□□□ 0.56
Trim11-203ENSMUST00000108810 Atg3Q9CPX6 314 aa18.54■□□□□ 0.56
Trim11-203ENSMUST00000108810 Marf1Q8BJ34 1730 aaKnown RBP18.54■□□□□ 0.56
Trim11-203ENSMUST00000108810 Ccdc146E9Q9F7 977 aa18.54■□□□□ 0.56
Trim11-203ENSMUST00000108810 PsapQ61207 557 aaKnown RBP18.54■□□□□ 0.56
Trim11-203ENSMUST00000108810 Txnrd1Q9JMH6 613 aa18.54■□□□□ 0.56
Trim11-203ENSMUST00000108810 Tbc1d9Q3UYK3 1264 aa18.53■□□□□ 0.56
Trim11-203ENSMUST00000108810 Chmp7Q8R1T1 451 aa18.53■□□□□ 0.56
Trim11-203ENSMUST00000108810 Bend3Q6PAL0 825 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Ppp1r42Q8R1Z4 357 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Ssfa2Q922B9 1252 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Fam50bQ9WTJ8 334 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Mmp8O70138 465 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Atp8b2P98199 1209 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Mre11Q61216 706 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Srgap3Q812A2 1099 aa18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Pdia6Q922R8 440 aaKnown RBP18.52■□□□□ 0.56
Trim11-203ENSMUST00000108810 Asic4Q7TNS7 539 aa18.51■□□□□ 0.55
Trim11-203ENSMUST00000108810 Slx1bQ8BX32 270 aa18.51■□□□□ 0.55
Trim11-203ENSMUST00000108810 Taf7Q9R1C0 341 aa18.51■□□□□ 0.55
Trim11-203ENSMUST00000108810 4930572O03RikQ8C5Y0 211 aa18.5■□□□□ 0.55
Trim11-203ENSMUST00000108810 CenppQ9CZ92 286 aa18.5■□□□□ 0.55
Trim11-203ENSMUST00000108810 Tnpo1Q8BFY9 898 aaKnown RBP18.5■□□□□ 0.55
Trim11-203ENSMUST00000108810 Nphp1Q9QY53 687 aa18.5■□□□□ 0.55
Trim11-203ENSMUST00000108810 Nek4Q9Z1J2 792 aa18.5■□□□□ 0.55
Trim11-203ENSMUST00000108810 Cdhr2E9Q7P9 1308 aa18.5■□□□□ 0.55
Trim11-203ENSMUST00000108810 Iqsec3Q3TES0 1195 aa18.49■□□□□ 0.55
Trim11-203ENSMUST00000108810 SympkQ80X82 1284 aa18.49■□□□□ 0.55
Trim11-203ENSMUST00000108810 Plekhd1B2RPU2 505 aa18.49■□□□□ 0.55
Trim11-203ENSMUST00000108810 Bcl2l13P59017 434 aa18.49■□□□□ 0.55
Trim11-203ENSMUST00000108810 Zap70P43404 618 aa18.48■□□□□ 0.55
Trim11-203ENSMUST00000108810 ZgpatQ8VDM1 511 aa18.48■□□□□ 0.55
Trim11-203ENSMUST00000108810 Exoc6bA6H5Z3 810 aa18.48■□□□□ 0.55
Trim11-203ENSMUST00000108810 Anapc15-psA0A140T8L6 141 aa18.46■□□□□ 0.55
Trim11-203ENSMUST00000108810 Cwc27Q3TKY6 469 aa18.46■□□□□ 0.55
Trim11-203ENSMUST00000108810 Larp1Q6ZQ58 1072 aaKnown RBP18.46■□□□□ 0.55
Trim11-203ENSMUST00000108810 Cyp46a1Q9WVK8 500 aa18.46■□□□□ 0.55
Trim11-203ENSMUST00000108810 Ddx60E9PZQ1 1711 aa18.46■□□□□ 0.55
Trim11-203ENSMUST00000108810 Ier5O89113 308 aa18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 Tlr7P58681 1050 aa18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 Map3k2Q61083 619 aa18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 Eif3bQ8JZQ9 803 aaKnown RBP18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 Tiam2Q6ZPF3 1715 aa18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 Igfbp6P47880 238 aa18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 HdgfP51859 237 aaKnown RBP18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 PappaQ8R4K8 1624 aa18.45■□□□□ 0.54
Trim11-203ENSMUST00000108810 Pard3Q99NH2 1333 aa18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm10093D3YYI8 482 aa18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 Hdac1O09106 482 aaKnown RBP18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 Irf9Q61179 399 aa18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 Acsbg1Q99PU5 721 aa18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 Mcmdc2E9Q956 681 aa18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 Zpr1Q62384 459 aa18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 Morc2aQ69ZX6 1030 aa18.44■□□□□ 0.54
Trim11-203ENSMUST00000108810 HellsQ60848 821 aa18.43■□□□□ 0.54
Trim11-203ENSMUST00000108810 Mphosph10Q810V0 681 aaKnown RBP18.43■□□□□ 0.54
Trim11-203ENSMUST00000108810 Ppp6r3Q922D4 844 aa18.43■□□□□ 0.54
Trim11-203ENSMUST00000108810 Speer4bQ9D9F7 267 aa18.43■□□□□ 0.54
Trim11-203ENSMUST00000108810 Shank3Q4ACU6 1730 aa18.42■□□□□ 0.54
Trim11-203ENSMUST00000108810 Shank2Q80Z38 1476 aa18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms