RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Apba2P98084 750 aa39.47■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Pim2Q62070 370 aa39.46■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Igsf1Q7TQA1 1317 aa39.46■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Col1a2Q01149 1372 aa39.46■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Ksr2Q3UVC0 959 aa39.44■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Tiam2Q6ZPF3 1715 aa39.44■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Pibf1E9Q6K3 756 aa39.43■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Ankrd13dQ6PD24 605 aa39.41■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Irx6Q9ER75 438 aa39.4■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Adcy9P51830 1353 aa39.4■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 1700019A02RikA0A087WPV9 146 aa39.4■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Iqsec3Q3TES0 1195 aa39.4■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Q8BT18 775 aa39.4■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 PigbQ9JJQ0 542 aa39.4■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Gas2l2Q5SSG4 860 aa39.39■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 Cyp2d12Q8BVD2 504 aa39.39■■■■□ 3.9
Ctdnep1-201ENSMUST00000108593 TefQ9JLC6 301 aa39.38■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Pde4dQ01063 747 aa39.36■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Q3TQI7 289 aaKnown RBP39.35■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Bicdl1A0JNT9 577 aa39.34■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Atf5O70191 283 aa39.34■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Chpf2Q3UU43 768 aa39.33■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Taf7Q9R1C0 341 aa39.33■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 CastP51125 788 aa39.32■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Mylk2Q8VCR8 613 aa39.32■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Ric1Q69ZJ7 1422 aa39.32■■■■□ 3.89
Ctdnep1-201ENSMUST00000108593 Ccar1Q8CH18 1146 aaKnown RBP39.32■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 GckrQ91X44 587 aa39.32■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 Cnnm1Q0GA42 951 aa39.31■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 Flad1Q8R123 492 aa39.31■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 Cers3Q1A3B0 383 aa39.3■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 Tnnt1O88346 262 aa39.29■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 OscarQ8VBT3 265 aa39.28■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 CoblQ5NBX1 1337 aaKnown RBP39.28■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 Msh6P54276 1358 aaKnown RBP39.27■■■■□ 3.88
Ctdnep1-201ENSMUST00000108593 Pdia6Q922R8 440 aaKnown RBP39.25■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Vamp4O70480 141 aa39.25■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Fkbp4P30416 458 aa39.25■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 PsapQ61207 557 aaKnown RBP39.25■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Tmem119Q8R138 280 aa39.25■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Kndc1Q0KK55 1742 aa39.24■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 DiexfQ8BTT6 772 aaKnown RBP39.24■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Miga2Q8BK03 593 aa39.23■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Nav1Q8CH77 1875 aa39.22■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Dlg5E9Q9R9 1921 aa39.22■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Smarcc1P97496 1104 aa39.22■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Prkab2Q6PAM0 271 aa39.21■■■■□ 3.87
Ctdnep1-201ENSMUST00000108593 Kank1E9Q238 1360 aa39.19■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Syde2E9PUP1 1314 aa39.19■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Bcl2l13P59017 434 aa39.19■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Trim26Q99PN3 545 aa39.19■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Gm12185Q5NCB2 835 aa39.18■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Gm13023A2A8N2 498 aa39.17■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Ccdc171E9Q1U1 1324 aa39.15■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Gm6268A2A3U9 297 aa39.15■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Clcn1Q64347 994 aa39.14■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Morc2aQ69ZX6 1030 aa39.14■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 SympkQ80X82 1284 aa39.14■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Plekhh1Q80TI1 1356 aa39.14■■■■□ 3.86
Ctdnep1-201ENSMUST00000108593 Ccdc60Q8C4J0 545 aa39.13■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 KarsQ99MN1 595 aaKnown RBP39.12■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 MetP16056 1379 aa39.12■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Cnksr1A2A9K7 700 aa39.11■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Fam198bQ3UPI1 517 aa39.11■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Polr3glQ8R0C0 218 aa39.11■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Ezh2Q61188 746 aaKnown RBP39.09■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Erbb4Q61527 1308 aa39.09■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Znf710Q3U288 666 aa39.08■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Chl1P70232 1209 aa39.07■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Nip7Q9CXK8 180 aaKnown RBP39.07■■■■□ 3.85
Ctdnep1-201ENSMUST00000108593 Slc39a6Q8C145 765 aa39.07■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Gigyf1Q99MR1 1044 aaKnown RBP39.07■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Zbtb1Q91VL9 713 aa39.06■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Lrrc43Q3V0L5 667 aa39.05■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 MeiocA2AG06 965 aa39.04■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 BcorQ8CGN4 1759 aa39.03■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Ttc41Q692V3 1318 aa39.03■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 G3bp1P97855 465 aaKnown RBP39.03■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Cavin2Q63918 418 aaKnown RBP39.02■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Akt1s1Q9D1F4 257 aa39.02■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Trim52Q8CDV4 233 aa39.01■■■■□ 3.84
Ctdnep1-201ENSMUST00000108593 Kif23E9Q5G3 953 aa39■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 NppbP40753 121 aa39■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 Plekhm2Q80TQ5 1018 aa39■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 Prr29B1ARI9 187 aa38.99■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 CoilQ5SU73 570 aa38.98■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 C4bP01029 1738 aa38.98■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 Col4a1P02463 1669 aa38.98■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 Sv2bQ8BG39 683 aa38.97■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 RtcbQ99LF4 505 aaKnown RBP38.96■■■■□ 3.83
Ctdnep1-201ENSMUST00000108593 Rapgef4Q9EQZ6 1011 aa38.94■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 L3mbtl2P59178 703 aa38.93■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Fam83gQ5SWY7 812 aa38.93■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Zfyve9A2A8R0 1397 aa38.93■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Upf2A2AT37 1269 aaKnown RBP38.92■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Eif5bQ05D44 1216 aaKnown RBP38.92■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Spata31d1bE9QA57 1361 aa38.92■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Igfbp6P47880 238 aa38.91■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Tmco5bQ80X59 307 aa38.91■■■■□ 3.82
Ctdnep1-201ENSMUST00000108593 Slfnl1Q8BHW9 410 aa38.91■■■■□ 3.82
Retrieved 100 of 22,080 RNA–protein pairs in 75 ms