RNA–Protein interactions for RNA: ENSMUST00000073691.3

Lima1-201, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lima1, Length 4,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-201ENSMUST00000073691 Aldh8a1Q8BH00 487 aa13.03□□□□□ -0.32
Lima1-201ENSMUST00000073691 Ubxn4Q8VCH8 506 aa13.03□□□□□ -0.32
Lima1-201ENSMUST00000073691 Krt85Q9Z2T6 507 aa13.03□□□□□ -0.32
Lima1-201ENSMUST00000073691 Gabpb2P81069 414 aa13.02□□□□□ -0.32
Lima1-201ENSMUST00000073691 Eif3aP23116 1344 aaKnown RBP13.02□□□□□ -0.32
Lima1-201ENSMUST00000073691 Lamc1P02468 1607 aaKnown RBP13.02□□□□□ -0.32
Lima1-201ENSMUST00000073691 Eya1P97767 591 aa13.02□□□□□ -0.32
Lima1-201ENSMUST00000073691 Zbtb45Q52KG4 520 aa13.02□□□□□ -0.32
Lima1-201ENSMUST00000073691 Tmem94Q7TSH8 1360 aa13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Rusc2Q80U22 1514 aa13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Pa2g4P50580 394 aaKnown RBP13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Cep57l1Q8VDS7 400 aa13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Skint5A7XUY5 1461 aa13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Gm21969J3QJZ1 289 aa13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Smg7Q5RJH6 1138 aaKnown RBP13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Polr3dQ91WD1 398 aa13.02□□□□□ -0.33
Lima1-201ENSMUST00000073691 Frmpd2A0A140LI67 1392 aa13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Taf3Q5HZG4 932 aa13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Col17a1Q07563 1470 aa13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Stk38Q91VJ4 465 aa13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Stx6Q9JKK1 255 aa13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 A0A0U1RNP2 1173 aa13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Cavin2Q63918 418 aaKnown RBP13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Gigyf1Q99MR1 1044 aaKnown RBP13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Med4Q9CQA5 270 aa13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 LlphQ9D945 130 aaKnown RBP13.01□□□□□ -0.33
Lima1-201ENSMUST00000073691 Tulp4Q9JIL5 1547 aa13□□□□□ -0.33
Lima1-201ENSMUST00000073691 Dnajc2P54103 621 aaKnown RBP13□□□□□ -0.33
Lima1-201ENSMUST00000073691 Gtf2f1Q3THK3 508 aaKnown RBP13□□□□□ -0.33
Lima1-201ENSMUST00000073691 RestQ8VIG1 1082 aa13□□□□□ -0.33
Lima1-201ENSMUST00000073691 Kif21bQ9QXL1 1668 aa13□□□□□ -0.33
Lima1-201ENSMUST00000073691 Kif3aP28741 701 aa13□□□□□ -0.33
Lima1-201ENSMUST00000073691 Fkbp5Q64378 456 aa13□□□□□ -0.33
Lima1-201ENSMUST00000073691 Spty2d1Q68FG3 682 aa13□□□□□ -0.33
Lima1-201ENSMUST00000073691 Krt82Q99M74 516 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Bag3Q9JLV1 577 aaKnown RBP12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Usp54Q8BL06 1588 aaKnown RBP12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Setbp1Q9Z180 1582 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Hoxb7P09024 217 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Atp8b2P98199 1209 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ppp6r1Q7TSI3 856 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Prune1Q8BIW1 454 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Pms1Q8K119 917 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ppp6r3Q922D4 844 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Mroh2aD3Z750 1679 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Strn4P58404 760 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Agtpbp1Q641K1 1218 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Soga3Q6NZL0 945 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ankib1Q6ZPS6 1085 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ccdc178Q8CDV0 866 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Pmfbp1Q9WVQ0 1022 aa12.99□□□□□ -0.33
Lima1-201ENSMUST00000073691 Zkscan16A2ALW2 728 aa12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Rbm28Q8CGC6 750 aaKnown RBP12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Rhot2Q8JZN7 620 aa12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Dhx16G3X8X0 1044 aaKnown RBP12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Atg4a-psA0A0G2JFS9 396 aa12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Fam184aE9PW83 1143 aa12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Atg4aQ8C9S8 396 aa12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Chd1lQ9CXF7 900 aa12.98□□□□□ -0.33
Lima1-201ENSMUST00000073691 Cct2P80314 535 aaKnown RBP12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ddx19aQ61655 478 aaKnown RBP12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ccp110Q7TSH4 1004 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 GphnQ8BUV3 769 aaKnown RBP12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Zbtb3Q91X45 518 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Nop14Q8R3N1 860 aaKnown RBP12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Kcnh5Q920E3 988 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Eif4g3Q80XI3 1579 aaKnown RBP12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Adcy5P84309 1262 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Irf9Q61179 399 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Kdm4aQ8BW72 1064 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Tmx3Q8BXZ1 456 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ak9G3UYQ4 1894 aa12.97□□□□□ -0.33
Lima1-201ENSMUST00000073691 Mcmdc2E9Q956 681 aa12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Bms1Q6PGF5 1284 aaKnown RBP12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Mrps27Q8BK72 415 aaKnown RBP12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Evc2Q8K1G2 1220 aa12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Echdc1Q9D9V3 322 aa12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Cyp27a1Q9DBG1 533 aa12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Kif1bQ60575 1816 aaKnown RBP12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ddx54Q8K4L0 874 aaKnown RBP12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 ZwintQ9CQU5 252 aa12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Plch2A2AP18 1501 aa12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Ttc41Q692V3 1318 aa12.96□□□□□ -0.33
Lima1-201ENSMUST00000073691 Zbtb21E9Q444 1094 aa12.96□□□□□ -0.34
Lima1-201ENSMUST00000073691 Washc4Q3UMB9 1173 aa12.96□□□□□ -0.34
Lima1-201ENSMUST00000073691 Pbrm1Q8BSQ9 1634 aaKnown RBP12.96□□□□□ -0.34
Lima1-201ENSMUST00000073691 Odf2lQ9D478 642 aa12.96□□□□□ -0.34
Lima1-201ENSMUST00000073691 Cdc42bpaQ3UU96 1719 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Rrbp1Q99PL5 1605 aaKnown RBP12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Ppfia1B2RXQ2 1266 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Cdkn1cP49919 348 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Ddx46Q569Z5 1032 aaKnown RBP12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Aldh1l2Q8K009 923 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Serpina10Q8R121 448 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Tbc1d7Q9D0K0 293 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Myo3aQ8K3H5 1613 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Tpx2A2APB8 745 aaKnown RBP12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Tpm3P21107 285 aaKnown RBP12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Lmbr1lQ9D1E5 489 aa12.95□□□□□ -0.34
Lima1-201ENSMUST00000073691 Talpid3E9PV87 1520 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms