RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Farp2Q91VS8 1065 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Ssfa2Q922B9 1252 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Col4a1P02463 1669 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Mast2Q60592 1734 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Ggnbp2Q5SV77 696 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 EngaseQ8BX80 734 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Kdm4cQ8VCD7 1054 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Antxr1Q9CZ52 562 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Trim26Q99PN3 545 aa9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Slx1bQ8BX32 270 aa9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Akap11E9Q777 1895 aa9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Lrp5Q91VN0 1614 aa9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Atg4a-psA0A0G2JFS9 396 aa9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Nol8Q3UHX0 1147 aaKnown RBP9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Atg4aQ8C9S8 396 aa9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 HnrnpuQ8VEK3 800 aaKnown RBP9.98□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Rtf1A2AQ19 715 aaKnown RBP9.97□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Sox12Q04890 314 aa9.97□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Tmco5bQ80X59 307 aa9.97□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Fer1l6E0CZ42 1862 aa9.97□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Nol11Q8BJW5 723 aaKnown RBP9.97□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Amotl2Q8K371 772 aa9.97□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Pdia6Q922R8 440 aaKnown RBP9.97□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Gm6268A2A3U9 297 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Mmp8O70138 465 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Prkar2bP31324 416 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Sv2bQ8BG39 683 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Polr3glQ8R0C0 218 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Cog6Q8R3I3 657 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Atp8b2P98199 1209 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 TatQ8QZR1 454 aa9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Eif2s2Q99L45 331 aaKnown RBP9.96□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Elp1Q7TT37 1333 aaKnown RBP9.96□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Bend3Q6PAL0 825 aa9.96□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Znf330Q922H9 316 aa9.96□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 KnstrnQ9D9Z1 312 aaKnown RBP9.96□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Sart3Q9JLI8 962 aaKnown RBP9.96□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Fam83gQ5SWY7 812 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Dzip1Q8BMD2 852 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Chpf2Q3UU43 768 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Tbc1d9Q3UYK3 1264 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 HellsQ60848 821 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Ppp6r3Q922D4 844 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 FanclQ9CR14 375 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 NgefQ8CHT1 710 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Noc3lQ8VI84 807 aaKnown RBP9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Nav1Q8CH77 1875 aa9.95□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Iqsec3Q3TES0 1195 aa9.94□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 U2surpQ6NV83 1029 aaKnown RBP9.94□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Echdc1Q9D9V3 322 aa9.94□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Trim30dE9PWL0 497 aa9.94□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Cluap1Q8R3P7 413 aa9.94□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Cacna1sQ02789 1880 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 CrklP47941 303 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Brinp3Q499E0 766 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Arhgef1Q61210 920 aaKnown RBP9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Eif4g2Q62448 906 aaKnown RBP9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Pdzd9Q9D9M4 266 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Adamtsl1Q8BLI0 1745 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Ankrd31A0A140LI88 1765 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Nucb1Q02819 459 aaKnown RBP9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Ppm1mQ8BU27 406 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 MyclP10166 368 aa9.93□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Pard3Q99NH2 1333 aa9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Terf2O35144 541 aa9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 CanxP35564 591 aaKnown RBP9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 OptnQ8K3K8 584 aa9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 AtrnQ9WU60 1428 aa9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Mcmdc2E9Q956 681 aa9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Gnai2P08752 355 aaKnown RBP9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 MlecQ6ZQI3 291 aaKnown RBP9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Tnpo1Q8BFY9 898 aaKnown RBP9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 ThemisQ8BGW0 636 aa9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Phkg2Q9DB30 406 aa9.92□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Ddit3P35639 168 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 TkfcQ8VC30 578 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Brpf1B2RRD7 1212 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 4930567H17RikQ3V0K5 233 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Dixdc1Q80Y83 711 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Cadps2Q8BYR5 1297 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Taf7Q9R1C0 341 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Plch1Q4KWH5 1682 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Lama4P97927 1816 aa9.91□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Pdia3P27773 505 aaKnown RBP9.9□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Aplp1Q03157 653 aa9.9□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Hsp90ab1P11499 724 aaKnown RBP9.9□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Cypt1Q8CH20 168 aa9.9□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Phrf1A6H619 1682 aa9.9□□□□□ -0.82
Ccdc60-201ENSMUST00000050178 Armcx1Q9CX83 456 aa9.9□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Abcc4E9Q236 1325 aa9.89□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Ier5O89113 308 aa9.89□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 GckrQ91X44 587 aa9.89□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Btbd11Q6GQW0 1109 aa9.88□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Plin1Q8CGN5 517 aa9.88□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 C4bP01029 1738 aa9.88□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Catsper2A2ARP9 588 aa9.88□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 RgmbQ7TQ33 436 aa9.88□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Ppp1r42Q8R1Z4 357 aa9.88□□□□□ -0.83
Ccdc60-201ENSMUST00000050178 Triml2E9PW10 424 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms