RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Rbm27Q5SFM8 1060 aaKnown RBP9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 NexnQ7TPW1 607 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Cyp46a1Q9WVK8 500 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Ptch1Q61115 1434 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Mdc1Q5PSV9 1707 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Birc3O08863 600 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Psen1P49769 467 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Smarca5Q91ZW3 1051 aaKnown RBP9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Irx5Q9JKQ4 484 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Atp2b2Q9R0K7 1198 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 OvosQ3UU35 1456 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Arhgap23Q69ZH9 1483 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Ubap1lG3UW59 384 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Gadd45bP22339 160 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Ythdc2B2RR83 1445 aaKnown RBP9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Gm45015A0A140LII9 184 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Gm18336A0A140LIU8 765 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Ccdc173A0JLY1 547 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Zkscan16A2ALW2 728 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Atp6v1dP57746 247 aa9.97□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Wdr78E9PYY5 807 aa9.96□□□□□ -0.81
Cdc40-201ENSMUST00000044166 AppP12023 770 aa9.96□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Anp32cQ64G17 123 aa9.96□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Filip1lQ6P6L0 1131 aa9.96□□□□□ -0.81
Cdc40-201ENSMUST00000044166 St18Q80TY4 1045 aa9.96□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Vwa3bJ9JI28 736 aa9.96□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Ica1lQ3TY65 431 aa9.96□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Mctp2Q5RJH2 878 aa9.96□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Utp14aQ640M1 767 aaKnown RBP9.96□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Cabp2Q9JLK4 216 aa9.96□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Kif24Q6NWW5 1356 aa9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 MccE9PWI3 1003 aa9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Rps6ka5Q8C050 863 aa9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Synj2Q9D2G5 1434 aa9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 AnlnQ8K298 1121 aaKnown RBP9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 U2af2P26369 475 aaKnown RBP9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Kif3aP28741 701 aa9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Prkar2bP31324 416 aa9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Zcwpw1Q6IR42 630 aa9.95□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Rnf123Q5XPI3 1314 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Atg4a-psA0A0G2JFS9 396 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Rtf1A2AQ19 715 aaKnown RBP9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Atg4aQ8C9S8 396 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 LlphQ9D945 130 aaKnown RBP9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Ano8Q6PB70 1060 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Serpina10Q8R121 448 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Chd1lQ9CXF7 900 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Zkscan2G3X952 960 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Zfp251Q6PCX8 632 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Olfml1Q8BSH2 233 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Klhdc4Q921I2 584 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Ap3b2Q9JME5 1082 aa9.94□□□□□ -0.82
Cdc40-201ENSMUST00000044166 CltcQ68FD5 1675 aaKnown RBP9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Smarce1O54941 411 aaKnown RBP9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Tbc1d31Q6NXY1 996 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Fam43bA2AM80 330 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Fam184aE9PW83 1143 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Capn2O08529 700 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Aifm3Q3TY86 605 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Casc1Q6TDU8 730 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Prrc2bQ7TPM1 1486 aaKnown RBP9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Phactr2B1AVP0 632 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Atp2b1G5E829 1220 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Mcm10Q0VBD2 885 aa9.93□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Cep170bQ80U49 1574 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Atp10aO54827 1508 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Knl1Q66JQ7 1612 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 1700019A02RikA0A087WPV9 146 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Nol11Q8BJW5 723 aaKnown RBP9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 E4f1Q8CCE9 783 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Bcar3Q9QZK2 820 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Chl1P70232 1209 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Kiaa0754Q69ZZ9 979 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Rsph6aQ8CDR2 708 aa9.92□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Uhrf1bp1lA2RSJ4 1457 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Anapc15P60007 132 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Q9D9H8 365 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Hsp90b1P08113 802 aaKnown RBP9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Bach2P97303 839 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Grpel1Q99LP6 217 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Stk31Q99MW1 1018 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 PtprmP28828 1452 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Hvcn1Q3U2S8 269 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 KinQ8K339 391 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Map3k19E9Q3S4 1311 aa9.91□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Gm45140A0A0N4SUM8 220 aa9.9□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Gm973E9Q295 1059 aa9.9□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Spef2Q8C9J3 1734 aa9.9□□□□□ -0.82
Cdc40-201ENSMUST00000044166 EzrP26040 586 aaKnown RBP9.9□□□□□ -0.82
Cdc40-201ENSMUST00000044166 EvcP57680 1005 aa9.9□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Cpa2Q504N0 417 aa9.9□□□□□ -0.82
Cdc40-201ENSMUST00000044166 RestQ8VIG1 1082 aa9.9□□□□□ -0.82
Cdc40-201ENSMUST00000044166 Mum1Q6DID5 682 aa9.9□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Phf23Q8BSN5 401 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Trim66Q924W6 1242 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Arhgef28P97433 1693 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Hmox1P14901 289 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ddx19aQ61655 478 aaKnown RBP9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Ptpdc1Q6NZK8 747 aa9.89□□□□□ -0.83
Cdc40-201ENSMUST00000044166 Nphp1Q9QY53 687 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms