RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Il1rapl2Q9ERS6 686 aa11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 Bag3Q9JLV1 577 aaKnown RBP11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 EprsQ8CGC7 1512 aaKnown RBP11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 Tshz3Q8CGV9 1081 aa11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 SrrtQ99MR6 875 aaKnown RBP11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 Dydc1Q9D9T0 175 aa11.46□□□□□ -0.58
Syne1-201ENSMUST00000041639 Slc12a5Q91V14 1138 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Fgd6Q69ZL1 1399 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Bin1O08539 588 aaKnown RBP11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Terf2O35144 541 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Adcy5P84309 1262 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ddx19aQ61655 478 aaKnown RBP11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Naip2Q9QUK4 1447 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Strn4P58404 760 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 SfswapQ3USH5 945 aaKnown RBP11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ncapg2Q6DFV1 1138 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Txndc16Q7TN22 820 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 4931400O07RikQ9D4M5 137 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 PogzQ8BZH4 1409 aaKnown RBP11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 NapbP28663 298 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Hs1bp3Q3TC93 395 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Cep131Q62036 1060 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Nlrp3Q8R4B8 1033 aa11.45□□□□□ -0.58
Syne1-201ENSMUST00000041639 Kcnj4P52189 445 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ppfia3P60469 1194 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ncbp1Q3UYV9 790 aaKnown RBP11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Fam43aQ8BUP8 424 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Riok1Q922Q2 567 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccdc178Q8CDV0 866 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Eif3bQ8JZQ9 803 aaKnown RBP11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Rnf34Q99KR6 376 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Gm42641I6L9G2 585 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Lrrfip1Q3UZ39 729 aaKnown RBP11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Jade2Q6ZQF7 829 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 AtripQ8BMG1 785 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Mcm10Q0VBD2 885 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Znf653Q6YND2 615 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Maats1Q8BRC6 783 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Gm14025A2AP89 1413 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccdc83Q9D4V3 305 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Stx6Q9JKK1 255 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ttc21bQ0HA38 1315 aa11.44□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccne1Q61457 408 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 NexmifQ5DTT1 1515 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 TimelessQ9R1X4 1197 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Rbm27Q5SFM8 1060 aaKnown RBP11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccdc158Q8CDI6 1109 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 BbxQ8VBW5 907 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Jakmip3Q5DTN8 844 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccdc155Q80VJ8 648 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccdc172Q810N9 267 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 MycnP03966 462 aaKnown RBP11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Limch1Q3UH68 1057 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Q3UJC8 639 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Phlpp2Q8BXA7 1320 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 CadpsQ80TJ1 1355 aa11.43□□□□□ -0.58
Syne1-201ENSMUST00000041639 Wdr63B2RY71 923 aa11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Mum1Q6DID5 682 aa11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 TxlnaQ6PAM1 554 aaKnown RBP11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Exoc8Q6PGF7 716 aa11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Serpina10Q8R121 448 aa11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Knop1Q9Z2Q2 478 aaKnown RBP11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Abcc5Q9R1X5 1436 aa11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Rai14Q9EP71 979 aaKnown RBP11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Zkscan7E9PVW1 718 aa11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Vps37dQ810I0 261 aa11.42□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ncoa1P70365 1447 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 ScaperF8VQ70 1398 aaKnown RBP11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Cep120Q7TSG1 988 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Cc2d1bQ8BRN9 848 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Zbtb3Q91X45 518 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Fbf1A2A870 1173 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Cdca7Q9D0M2 382 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Anapc15-psA0A140T8L6 141 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 TchhA0A0B4J1F9 1599 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Tax1bp1Q3UKC1 814 aaKnown RBP11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccdc150Q8CDI7 1110 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Mmel1Q9JLI3 765 aa11.41□□□□□ -0.58
Syne1-201ENSMUST00000041639 Paxbp1P58501 919 aa11.4□□□□□ -0.58
Syne1-201ENSMUST00000041639 A2mQ6GQT1 1474 aa11.4□□□□□ -0.58
Syne1-201ENSMUST00000041639 LyarQ08288 388 aaKnown RBP11.4□□□□□ -0.58
Syne1-201ENSMUST00000041639 Soga3Q6NZL0 945 aa11.4□□□□□ -0.58
Syne1-201ENSMUST00000041639 Tacc1Q6Y685 774 aa11.4□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ube2hP62257 183 aa11.4□□□□□ -0.58
Syne1-201ENSMUST00000041639 Ccdc93Q7TQK5 629 aa11.4□□□□□ -0.58
Syne1-201ENSMUST00000041639 Mug1P28665 1476 aa11.4□□□□□ -0.59
Syne1-201ENSMUST00000041639 Kcnh5Q920E3 988 aa11.4□□□□□ -0.59
Syne1-201ENSMUST00000041639 Hspa4Q61316 841 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Abcf1Q6P542 837 aaKnown RBP11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Pik3r4Q8VD65 1358 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Chpf2Q3UU43 768 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Smc1bQ920F6 1248 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Pcf11G3X9Z4 1553 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Stx1aO35526 288 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Hand2Q61039 217 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Larp6Q8BN59 492 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Sugp2Q8CH09 1067 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Igbp1bQ9QZ29 343 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ankrd44B2RXR6 993 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Polr3aB2RXC6 1390 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms