RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tsr2Q8C8T8 191 aa13.47□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Ndufa8Q9DCJ5 172 aa13.47□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Ddx11Q6AXC6 880 aa13.47□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Sos1Q62245 1319 aa13.46□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Mum1Q6DID5 682 aa13.46□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Rsph6aQ8CDR2 708 aa13.46□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Hmgn5Q9JL35 406 aa13.46□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Nucb2P81117 420 aa13.46□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Nxf2Q4ZGD8 691 aa13.46□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Rps6ka5Q8C050 863 aa13.46□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Cdc42bpaQ3UU96 1719 aa13.46□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Clstn1Q9EPL2 979 aa13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Rrbp1Q99PL5 1605 aaKnown RBP13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Asxl2Q8BZ32 1370 aa13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 AppP12023 770 aa13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Jarid2Q62315 1234 aa13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Chmp3Q9CQ10 224 aa13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Kcnj4P52189 445 aa13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Zfp51Q3U4L8 781 aa13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Ddx19aQ61655 478 aaKnown RBP13.45□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Vwa3bJ9JI28 736 aa13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Tbc1d8Q9Z1A9 1134 aa13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Nol8Q3UHX0 1147 aaKnown RBP13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Pde3bQ61409 1100 aa13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Il1rapl2Q9ERS6 686 aa13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 HnrnpmQ9D0E1 729 aaKnown RBP13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Pik3r4Q8VD65 1358 aa13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Zap70P43404 618 aa13.44□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Krt85Q9Z2T6 507 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Eif4a2P10630 407 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Tpm3P21107 285 aaKnown RBP13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Chpf2Q3UU43 768 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Tmx1Q8VBT0 278 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 PnnO35691 725 aaKnown RBP13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Anapc15P60007 132 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Abca16E9PWJ7 1678 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Syt1P46096 421 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Tm6sf1P58749 370 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Ccar2Q8VDP4 922 aaKnown RBP13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Cfap65Q3V0B4 1847 aa13.43□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Iqgap1Q9JKF1 1657 aaKnown RBP13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 BccipQ9CWI3 316 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Rnf20Q5DTM8 973 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Fam208aQ69ZR9 1610 aaKnown RBP13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Mast1Q9R1L5 1570 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Fam114a1Q9D281 569 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Cnpy2Q9QXT0 182 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 A0A0U1RNP2 1173 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Cavin2Q63918 418 aaKnown RBP13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Polr3dQ91WD1 398 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Myo3aQ8K3H5 1613 aa13.42□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Atp2b3Q0VF55 1220 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Ppp1r18Q8BQ30 594 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Q8C5K5 320 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Clasp1Q80TV8 1535 aaKnown RBP13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Card6E9PWH2 1175 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Tyro3P55144 880 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Utp18Q5SSI6 552 aaKnown RBP13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Nrbp1Q99J45 535 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Oas2E9Q9A9 742 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Ccne1Q61457 408 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Irx4Q9QY61 515 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Wdr33Q8K4P0 1330 aaKnown RBP13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Mroh2aD3Z750 1679 aa13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Esyt1Q3U7R1 1092 aaKnown RBP13.41□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Pa2g4P50580 394 aaKnown RBP13.4□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Aldh1l2Q8K009 923 aa13.4□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Mx2Q9WVP9 655 aa13.4□□□□□ -0.26
Topbp1-201ENSMUST00000035164 EspnlQ3UYR4 1005 aa13.4□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Ncbp1Q3UYV9 790 aaKnown RBP13.4□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Atp8b2P98199 1209 aa13.4□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Slc26a8Q8R0C3 999 aa13.4□□□□□ -0.26
Topbp1-201ENSMUST00000035164 Wdr24Q8CFJ9 790 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Kdm5aQ3UXZ9 1690 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Setd1aE9PYH6 1716 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Map7d2A2AG50 781 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 PalldQ9ET54 1408 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Bin1O08539 588 aaKnown RBP13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Zscan22Q8BGS5 496 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Kif24Q6NWW5 1356 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Calcoco2A2A6M5 331 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Mcmdc2E9Q956 681 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Ubxn4Q8VCH8 506 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 AnkarA2RT91 1465 aa13.39□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Mmp8O70138 465 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Tti2Q8BGV4 512 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Psma5Q9Z2U1 241 aaKnown RBP13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Gpatch3Q8BIY1 525 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Otud6bQ8K2H2 294 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cep57l1Q8VDS7 400 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 SrrtQ99MR6 875 aaKnown RBP13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cdca7lQ922M5 438 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Abcc2Q8VI47 1543 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Naip7Q9JIB3 1402 aa13.38□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Wdr93Q402B2 695 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Frat1P70339 274 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 HypkQ9CR41 129 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Ap3b2Q9JME5 1082 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Sh3bp1P55194 680 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cep135Q6P5D4 1140 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms