RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 AnlnQ8K298 1121 aaKnown RBP11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ciz1Q8VEH2 845 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Erich4Q3UNU4 136 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Erc2Q6PH08 957 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Atg3Q9CPX6 314 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Rbm33Q9CXK9 1231 aaKnown RBP11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Odf2lQ9D478 642 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Myo1cQ9WTI7 1063 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Atp10dQ8K2X1 1416 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Mcm3P25206 812 aaKnown RBP11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Snx13Q6PHS6 957 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ccdc178Q8CDV0 866 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Tlcd1Q99JT6 247 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Dnajc5bQ9CQ94 199 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 U2af1Q9D883 239 aaKnown RBP11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 MycbpQ9EQS3 103 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 ErbinQ80TH2 1402 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Abcc6Q9R1S7 1498 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Casz1Q9CWL2 1761 aa11.97□□□□□ -0.49
Copb1-201ENSMUST00000033012 Klra4Q60651 263 aa11.96□□□□□ -0.49
Copb1-201ENSMUST00000033012 Naa30Q8CES0 364 aa11.96□□□□□ -0.49
Copb1-201ENSMUST00000033012 Bicd2Q921C5 820 aa11.96□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ino80Q6ZPV2 1559 aa11.96□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ercc3P49135 783 aa11.96□□□□□ -0.49
Copb1-201ENSMUST00000033012 Spata16Q8C636 571 aa11.96□□□□□ -0.49
Copb1-201ENSMUST00000033012 Znf541Q0GGX2 1363 aa11.96□□□□□ -0.5
Copb1-201ENSMUST00000033012 Kiaa1211Q5PR69 1207 aa11.96□□□□□ -0.5
Copb1-201ENSMUST00000033012 Ap3b2Q9JME5 1082 aa11.96□□□□□ -0.5
Copb1-201ENSMUST00000033012 PdcQ9QW08 244 aa11.96□□□□□ -0.5
Copb1-201ENSMUST00000033012 Mtx1P47802 317 aa11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 Ddx19aQ61655 478 aaKnown RBP11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 Tsen2Q6P7W5 460 aa11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 HnrnpuQ8VEK3 800 aaKnown RBP11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 Nrbp1Q99J45 535 aa11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 Sparcl1P70663 650 aa11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 Gtf2e1Q9D0D5 440 aa11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 Hmgn5Q9JL35 406 aa11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 PaskQ8CEE6 1383 aa11.95□□□□□ -0.5
Copb1-201ENSMUST00000033012 Neurl4Q5NCX5 1563 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Surf1P09925 306 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Spag5Q7TME2 1165 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Sf3a1Q8K4Z5 791 aaKnown RBP11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Abcc1O35379 1528 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Bach1P97302 739 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Zkscan3Q91VW9 553 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 FanclQ9CR14 375 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Spata31d1bE9QA57 1361 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Smarce1O54941 411 aaKnown RBP11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Kdm2aP59997 1161 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Plekhm2Q80TQ5 1018 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Fsd2Q8BZ52 692 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Mroh2aD3Z750 1679 aa11.94□□□□□ -0.5
Copb1-201ENSMUST00000033012 Anapc15P60007 132 aa11.93□□□□□ -0.5
Copb1-201ENSMUST00000033012 Wdr24Q8CFJ9 790 aa11.93□□□□□ -0.5
Copb1-201ENSMUST00000033012 Ccdc7Q9D541 371 aa11.93□□□□□ -0.5
Copb1-201ENSMUST00000033012 AW822073A0A0N4SUK1 652 aa11.93□□□□□ -0.5
Copb1-201ENSMUST00000033012 Hmx1O70218 332 aa11.93□□□□□ -0.5
Copb1-201ENSMUST00000033012 Ano6Q6P9J9 911 aa11.93□□□□□ -0.5
Copb1-201ENSMUST00000033012 Zranb2Q9R020 330 aaKnown RBP11.93□□□□□ -0.5
Copb1-201ENSMUST00000033012 Strn4P58404 760 aa11.92□□□□□ -0.5
Copb1-201ENSMUST00000033012 Cgref1Q8R1U2 281 aa11.92□□□□□ -0.5
Copb1-201ENSMUST00000033012 Fam208aQ69ZR9 1610 aaKnown RBP11.92□□□□□ -0.5
Copb1-201ENSMUST00000033012 EvcP57680 1005 aa11.92□□□□□ -0.5
Copb1-201ENSMUST00000033012 Cavin4A2AMM0 362 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Frat1P70339 274 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Tmco5bQ80X59 307 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 KinQ8K339 391 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Cwc15Q9JHS9 229 aaKnown RBP11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Sytl4Q9R0Q1 673 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Pmfbp1Q9WVQ0 1022 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Cdk12Q14AX6 1484 aaKnown RBP11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 CenpjQ569L8 1344 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Tbc1d4Q8BYJ6 1307 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Ube2oQ6ZPJ3 1288 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Adcy2Q80TL1 1090 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Adck5Q80V03 582 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Phactr2B1AVP0 632 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Plcb3P51432 1234 aaKnown RBP11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Pnpla2Q8BJ56 486 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Q9D2X8 372 aa11.91□□□□□ -0.5
Copb1-201ENSMUST00000033012 Elmsan1E9Q2I4 1089 aaKnown RBP11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Zpr1Q62384 459 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Nol12Q8BG17 217 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Ssr1Q9CY50 286 aaKnown RBP11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Wdr33Q8K4P0 1330 aaKnown RBP11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Atp7bQ64446 1462 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Tyro3P55144 880 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Kcnd1Q03719 651 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Zbtb38Q3LR78 1197 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Prdm10Q3UTQ7 1184 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Znf532Q6NXK2 1036 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Tomm22Q9CPQ3 142 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Nfe2l3Q9WTM4 660 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 DnmbpQ6TXD4 1580 aa11.9□□□□□ -0.5
Copb1-201ENSMUST00000033012 Q4VA45 678 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Nup88Q8CEC0 753 aaKnown RBP11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 DpydQ8CHR6 1025 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Exoc6bA6H5Z3 810 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 MccE9PWI3 1003 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Lrrc8aQ80WG5 810 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms