RNA–Protein interactions for RNA: ENSMUST00000031817.9

Herc6-201, Transcript of E3 ISG15--protein ligase Herc6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Herc6, Length 4,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6-201ENSMUST00000031817 Polr3gQ6NXY9 223 aa12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ush1cQ9ES64 910 aa12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ccdc173A0JLY1 547 aa12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 Cdkl5Q3UTQ8 938 aa12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 EappQ5BU09 281 aa12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 Slf2Q6P9P0 1278 aa12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 Taf7Q9R1C0 341 aa12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 Kif1bQ60575 1816 aaKnown RBP12.64□□□□□ -0.39
Herc6-201ENSMUST00000031817 Cwc25Q9DBF7 416 aa12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 AidaQ8C4Q6 305 aa12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 Hnrnpul1Q8VDM6 859 aaKnown RBP12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 Cep57l1Q8VDS7 400 aa12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 Trim30aP15533 496 aa12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 Slc7a3P70423 618 aa12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 Nol12Q8BG17 217 aa12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 Kdm3aQ6PCM1 1323 aa12.63□□□□□ -0.39
Herc6-201ENSMUST00000031817 Usp54Q8BL06 1588 aaKnown RBP12.62□□□□□ -0.39
Herc6-201ENSMUST00000031817 Znf335A2A5K6 1337 aa12.62□□□□□ -0.39
Herc6-201ENSMUST00000031817 Irgm2A0A140LIF8 407 aa12.62□□□□□ -0.39
Herc6-201ENSMUST00000031817 Stk11ipQ3TAA7 1072 aa12.62□□□□□ -0.39
Herc6-201ENSMUST00000031817 Fsd2Q8BZ52 692 aa12.62□□□□□ -0.39
Herc6-201ENSMUST00000031817 Smarca5Q91ZW3 1051 aaKnown RBP12.62□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ttc5Q99LG4 440 aa12.61□□□□□ -0.39
Herc6-201ENSMUST00000031817 Nsfl1cQ9CZ44 370 aaKnown RBP12.61□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ppp6r1Q7TSI3 856 aa12.61□□□□□ -0.39
Herc6-201ENSMUST00000031817 Stk38Q91VJ4 465 aa12.61□□□□□ -0.39
Herc6-201ENSMUST00000031817 Cdc45Q9Z1X9 566 aa12.61□□□□□ -0.39
Herc6-201ENSMUST00000031817 Plxnc1Q9QZC2 1574 aa12.61□□□□□ -0.39
Herc6-201ENSMUST00000031817 Atp10aO54827 1508 aa12.61□□□□□ -0.39
Herc6-201ENSMUST00000031817 Gtf2f1Q3THK3 508 aaKnown RBP12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ifit1bl2Q3U687 466 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Hoxc9P09633 260 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Fsd1Q7TPM6 496 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Efcab2Q9CQ46 164 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Pprc1Q6NZN1 1644 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Eya1P97767 591 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ppp4r3bQ922R5 820 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Znf608Q56A10 1511 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Plekhg1F6S200 1446 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Phlpp2Q8BXA7 1320 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 March6Q6ZQ89 909 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Slain2Q8CI08 581 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 GckrQ91X44 587 aa12.6□□□□□ -0.39
Herc6-201ENSMUST00000031817 Anapc15-psA0A140T8L6 141 aa12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Spty2d1Q68FG3 682 aa12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ripk4Q9ERK0 786 aa12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Sel1lQ9Z2G6 790 aa12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Isy1Q69ZQ2 285 aaKnown RBP12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ginm1Q91WR6 327 aa12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ccdc43Q9CR29 222 aaKnown RBP12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Znf287Q9EQB9 759 aa12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 ThemisQ8BGW0 636 aa12.59□□□□□ -0.39
Herc6-201ENSMUST00000031817 Kiaa0754Q69ZZ9 979 aa12.58□□□□□ -0.39
Herc6-201ENSMUST00000031817 Ncbp3Q8BZR9 615 aaKnown RBP12.58□□□□□ -0.39
Herc6-201ENSMUST00000031817 Wasf1Q8R5H6 559 aa12.58□□□□□ -0.39
Herc6-201ENSMUST00000031817 Klhdc4Q921I2 584 aa12.58□□□□□ -0.39
Herc6-201ENSMUST00000031817 Cfap65Q3V0B4 1847 aa12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 EzrP26040 586 aaKnown RBP12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Ccnl1Q52KE7 532 aaKnown RBP12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Kcna6Q61923 529 aa12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Rbm26Q6NZN0 1012 aaKnown RBP12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Nip7Q9CXK8 180 aaKnown RBP12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Klf15Q9EPW2 415 aa12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Pms1Q8K119 917 aa12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Rapgef3Q8VCC8 918 aa12.58□□□□□ -0.4
Herc6-201ENSMUST00000031817 Zscan20B2KFW1 1030 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Kif14L0N7N1 1674 aaKnown RBP12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Rufy2Q8R4C2 606 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Tfip11Q9ERA6 838 aaKnown RBP12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Depdc5P61460 1591 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Gm16486A0A1D5RMD1 1434 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Krt85Q9Z2T6 507 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Dnmt1P13864 1620 aaKnown RBP12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Wdr78E9PYY5 807 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Zap70P43404 618 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Fam83gQ5SWY7 812 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Gimap8Q75N62 688 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Plekho1Q9JIY0 408 aa12.57□□□□□ -0.4
Herc6-201ENSMUST00000031817 Gpatch11Q3UFS4 262 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Nlgn1Q99K10 843 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 PtprtQ99M80 1454 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Speer4dL7N216 212 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Vamp4O70480 141 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Aplp1Q03157 653 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Spg7Q3ULF4 781 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Ankrd50F7BE84 1390 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Smarcc1P97496 1104 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Fam13aQ8BGI4 693 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Rnf17Q99MV7 1640 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 Cyp26c1B2RXA7 518 aa12.56□□□□□ -0.4
Herc6-201ENSMUST00000031817 CrklP47941 303 aa12.55□□□□□ -0.4
Herc6-201ENSMUST00000031817 Ddb1Q3U1J4 1140 aaKnown RBP12.55□□□□□ -0.4
Herc6-201ENSMUST00000031817 Cyp7a1Q64505 503 aa12.55□□□□□ -0.4
Herc6-201ENSMUST00000031817 Cnnm3Q32NY4 713 aa12.55□□□□□ -0.4
Herc6-201ENSMUST00000031817 Wdr63B2RY71 923 aa12.55□□□□□ -0.4
Herc6-201ENSMUST00000031817 Aldh1l2Q8K009 923 aa12.55□□□□□ -0.4
Herc6-201ENSMUST00000031817 Bcar3Q9QZK2 820 aa12.55□□□□□ -0.4
Herc6-201ENSMUST00000031817 NapbP28663 298 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Gjb2Q00977 226 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 GptQ8QZR5 496 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms