RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Atp2b2Q9R0K7 1198 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 MccE9PWI3 1003 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Cpa2Q504N0 417 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Gtpbp4Q99ME9 634 aaKnown RBP11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Tbc1d8Q9Z1A9 1134 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Knl1Q66JQ7 1612 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Strn4P58404 760 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Usp16Q99LG0 825 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Ube2hP62257 183 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Mmel1Q9JLI3 765 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Mroh1E0CZ22 1640 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Lmod3E9QA62 571 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 EvcP57680 1005 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Ercc6lQ8BHK9 1240 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 KinQ8K339 391 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Zkscan2G3X952 960 aa11.98□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Kif13aQ9EQW7 1749 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Cdkn1cP49919 348 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Zscan22Q8BGS5 496 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Arhgap23Q69ZH9 1483 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Oas2E9Q9A9 742 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Cfap73J3QPZ5 306 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Kiaa0754Q69ZZ9 979 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Rab3gap1Q80UJ7 981 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Phactr2B1AVP0 632 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Cspp1B2RX88 1205 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Utp18Q5SSI6 552 aaKnown RBP11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 RestQ8VIG1 1082 aa11.97□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Prkar2bP31324 416 aa11.96□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Fez2Q6TYB5 348 aa11.96□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Zranb1Q7M760 708 aa11.96□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Ppp1r15aP17564 657 aa11.96□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Plcd3Q8K2J0 785 aa11.96□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Utp3Q9JI13 469 aaKnown RBP11.96□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Elmsan1E9Q2I4 1089 aaKnown RBP11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Cfap157Q0VFX2 523 aa11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Bcar3Q9QZK2 820 aa11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Bms1Q6PGF5 1284 aaKnown RBP11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Zeb2Q9R0G7 1215 aa11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 RdxP26043 583 aaKnown RBP11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Samm50Q8BGH2 469 aa11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Dnajc5gQ8C632 165 aa11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Cc2d1aQ8K1A6 943 aa11.95□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Frmpd2A0A140LI67 1392 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Gsto1O09131 240 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ms4a1P19437 291 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Cdk4P30285 303 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Chl1P70232 1209 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ccdc178Q8CDV0 866 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 4930407I10RikD3Z5T8 1512 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ess2O70279 479 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Nop14Q8R3N1 860 aaKnown RBP11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ddx41Q91VN6 622 aaKnown RBP11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Prune1Q8BIW1 454 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Noc3lQ8VI84 807 aaKnown RBP11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Add3Q9QYB5 706 aaKnown RBP11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Atp10aO54827 1508 aa11.94□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Tpd52l1O54818 204 aa11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Aifm3Q3TY86 605 aa11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Gtpbp6Q3U6U5 514 aa11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Pdzrn3Q69ZS0 1063 aa11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Pcmtd1P59913 357 aa11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Adgrb1Q3UHD1 1582 aa11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Zkscan7E9PVW1 718 aa11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 MlecQ6ZQI3 291 aaKnown RBP11.93□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Brpf3B2KF05 1204 aaKnown RBP11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Hoxa7P02830 229 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Sh3bp1P55194 680 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Gpatch11Q3UFS4 262 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ints3Q7TPD0 1041 aaKnown RBP11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ttc27Q8CD92 847 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 PdcQ9QW08 244 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Lemd3Q9WU40 921 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Arhgef28P97433 1693 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 CebpzP53569 1052 aaKnown RBP11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 MpndQ3TV65 487 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Naa30Q8CES0 364 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Chmp4cQ9D7F7 232 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ifi35Q9D8C4 286 aa11.92□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ms4a2P20490 235 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Usp25P57080 1055 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 U2surpQ6NV83 1029 aaKnown RBP11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ptpdc1Q6NZK8 747 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Cchcr1Q8K2I2 770 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Taf3Q5HZG4 932 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Stx6Q9JKK1 255 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 PtprmP28828 1452 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 CalcaP70160 136 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Zkscan5Q9Z1D8 819 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 NktrP30415 1453 aa11.91□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Mcm3P25206 812 aaKnown RBP11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Wdr24Q8CFJ9 790 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Zfp804bA0A0G2JGH6 1343 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Uhrf1bp1lA2RSJ4 1457 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Snx13Q6PHS6 957 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Zfp397Q7TNK4 527 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Klhdc4Q921I2 584 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Senp3Q9EP97 568 aaKnown RBP11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Ubn2Q80WC1 1314 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Plekhg1F6S200 1446 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms