RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Il1rapl2Q9ERS6 686 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Zranb3Q6NZP1 1069 aa11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Chd1lQ9CXF7 900 aa11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Clasp1Q80TV8 1535 aaKnown RBP11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 ShprhQ7TPQ3 1674 aa11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Tm6sf1P58749 370 aa11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 NaspQ99MD9 773 aaKnown RBP11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Tomm22Q9CPQ3 142 aa11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Cdc42bpbQ7TT50 1713 aa11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Elp1Q7TT37 1333 aaKnown RBP11.31□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Ppfia3P60469 1194 aa11.3□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Jarid2Q62315 1234 aa11.3□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Psma5Q9Z2U1 241 aaKnown RBP11.3□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Uggt1Q6P5E4 1551 aa11.3□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Rims1Q99NE5 1463 aa11.3□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Pa2g4P50580 394 aaKnown RBP11.3□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Plxnc1Q9QZC2 1574 aa11.3□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Cct4P80315 539 aaKnown RBP11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Abca6Q8K441 1624 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Cep152A2AUM9 1736 aaKnown RBP11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Tpx2A2APB8 745 aaKnown RBP11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Mcmdc2E9Q956 681 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Pank2Q3U4S0 443 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Ccdc66Q6NS45 935 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Nup88Q8CEC0 753 aaKnown RBP11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Stx6Q9JKK1 255 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 PtprtQ99M80 1454 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 EzrP26040 586 aaKnown RBP11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Bms1Q6PGF5 1284 aaKnown RBP11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Fam13bQ8K2H3 851 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Pdlim2Q8R1G6 349 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 PdcQ9QW08 244 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Hfm1D3Z4R1 1434 aa11.29□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Mctp1E9PV86 951 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 BcanQ61361 883 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Ggt6Q6PDE7 497 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Nckap5lQ6GQX2 1323 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Vgll3P85442 326 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Kif24Q6NWW5 1356 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Strn4P58404 760 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Chl1P70232 1209 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Map3k2Q61083 619 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Pdzrn3Q69ZS0 1063 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 TnmdQ9EP64 317 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Mlh1Q9JK91 760 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Frmpd2A0A140LI67 1392 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Mmp8O70138 465 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Adcy5P84309 1262 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Nol11Q8BJW5 723 aaKnown RBP11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 PhaxQ9JJT9 385 aaKnown RBP11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Yeats2Q3TUF7 1407 aa11.28□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Itsn2Q9Z0R6 1659 aa11.27□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Gm45015A0A140LII9 184 aa11.27□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Gm18336A0A140LIU8 765 aa11.27□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Hook1Q8BIL5 728 aa11.27□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Naa30Q8CES0 364 aa11.27□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Polr3dQ91WD1 398 aa11.27□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Uggt2E9Q4X2 1504 aa11.27□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Ddx19aQ61655 478 aaKnown RBP11.27□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Ccdc178Q8CDV0 866 aa11.27□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Med4Q9CQA5 270 aa11.27□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Serpina10Q8R121 448 aa11.27□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Neurl4Q5NCX5 1563 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Frmd3Q8BHD4 595 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Hecw1Q8K4P8 1604 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Evi5lH3BKQ3 813 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Fam50bQ9WTJ8 334 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Dhx16G3X8X0 1044 aaKnown RBP11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 MarsQ68FL6 902 aaKnown RBP11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Q8BT18 775 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 NhsB1AV60 1647 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Tmem94Q7TSH8 1360 aa11.26□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Ier5O89113 308 aa11.25□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Fam184aE9PW83 1143 aa11.25□□□□□ -0.61
Col6a1-201ENSMUST00000001147 TefQ9JLC6 301 aa11.25□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Pmfbp1Q9WVQ0 1022 aa11.25□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Kif3aP28741 701 aa11.25□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Irgm2A0A140LIF8 407 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 NcapgE9PWG6 1004 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Cavin1O54724 392 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 ScaperF8VQ70 1398 aaKnown RBP11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Nlgn1Q99K10 843 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Robo2Q7TPD3 1470 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Ppfia1B2RXQ2 1266 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Idi1P58044 227 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Smc4Q8CG47 1286 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Hmgn5Q9JL35 406 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Krt85Q9Z2T6 507 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Abca8bQ8K440 1620 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 GpkowQ56A08 488 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Snx13Q6PHS6 957 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Cep57l1Q8VDS7 400 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Echdc1Q9D9V3 322 aa11.24□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Mmel1Q9JLI3 765 aa11.23□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Zcchc11B2RX14 1644 aaKnown RBP11.23□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Eif2ak4Q9QZ05 1648 aa11.23□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Ncapd2Q8K2Z4 1392 aa11.23□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Ube2hP62257 183 aa11.23□□□□□ -0.61
Col6a1-201ENSMUST00000001147 Bach1P97302 739 aa11.23□□□□□ -0.61
Col6a1-201ENSMUST00000001147 EspnlQ3UYR4 1005 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms