Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
NRXN3Q9Y4C0 AC148477.8-201ENST00000624298 468 ntBASIC26.33■■□□□ 1.81
NRXN3Q9Y4C0 AC068587.9-201ENST00000641814 219 ntBASIC26.33■■□□□ 1.81
NRXN3Q9Y4C0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NRXN3Q9Y4C0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NRXN3Q9Y4C0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC26.33■■□□□ 1.81
NRXN3Q9Y4C0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NRXN3Q9Y4C0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
NRXN3Q9Y4C0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NRXN3Q9Y4C0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 AC112907.3-201ENST00000577781 2400 ntBASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NRXN3Q9Y4C0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 AL590627.1-203ENST00000421194 1026 ntBASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 KRT18P67-201ENST00000432816 1264 ntBASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 AC139530.3-201ENST00000620344 690 ntBASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 KRT8P50-201ENST00000562022 1438 ntBASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NRXN3Q9Y4C0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 AF228730.7-201ENST00000641842 219 ntBASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 MTMR9LP-203ENST00000426597 1545 ntBASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 IRX1P1-201ENST00000438849 1838 ntBASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 UBQLN4P1-201ENST00000461599 1801 ntBASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 AL353692.3-201ENST00000407031 1396 ntBASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NRXN3Q9Y4C0 VENTXP7-201ENST00000475503 772 ntBASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 HES2-202ENST00000377836 507 ntTSL 2 BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NRXN3Q9Y4C0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.27■■□□□ 1.8
NRXN3Q9Y4C0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NRXN3Q9Y4C0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NRXN3Q9Y4C0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.27■■□□□ 1.8
NRXN3Q9Y4C0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
NRXN3Q9Y4C0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC26.27■■□□□ 1.8
NRXN3Q9Y4C0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms