Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 MTMR9LP-203ENST00000426597 1545 ntBASIC25.68■■□□□ 1.7
NINLQ9Y2I6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 AC093525.10-201ENST00000625130 1569 ntBASIC25.67■■□□□ 1.7
NINLQ9Y2I6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 AC083906.6-201ENST00000641366 219 ntBASIC25.67■■□□□ 1.7
NINLQ9Y2I6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NINLQ9Y2I6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 PVRIG2P-201ENST00000435460 978 ntBASIC25.66■■□□□ 1.7
NINLQ9Y2I6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
NINLQ9Y2I6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 AC006333.2-201ENST00000607957 2099 ntBASIC25.65■■□□□ 1.7
NINLQ9Y2I6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 Z98044.1-201ENST00000632503 1764 ntBASIC25.65■■□□□ 1.7
NINLQ9Y2I6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 ATP5G2P1-201ENST00000433580 426 ntBASIC25.65■■□□□ 1.7
NINLQ9Y2I6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.65■■□□□ 1.7
NINLQ9Y2I6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 AC093458.2-201ENST00000623150 629 ntBASIC25.65■■□□□ 1.7
NINLQ9Y2I6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 AL391807.1-203ENST00000604392 2365 ntBASIC25.65■■□□□ 1.7
NINLQ9Y2I6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.65■■□□□ 1.7
NINLQ9Y2I6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NINLQ9Y2I6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NINLQ9Y2I6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC25.64■■□□□ 1.7
NINLQ9Y2I6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.64■■□□□ 1.7
NINLQ9Y2I6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
NINLQ9Y2I6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NINLQ9Y2I6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
NINLQ9Y2I6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC25.64■■□□□ 1.69
NINLQ9Y2I6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
NINLQ9Y2I6 CYP51A1P1-201ENST00000492267 1507 ntBASIC25.64■■□□□ 1.69
NINLQ9Y2I6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
NINLQ9Y2I6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC25.64■■□□□ 1.69
NINLQ9Y2I6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 MIR662-201ENST00000384847 95 ntBASIC25.63■■□□□ 1.69
NINLQ9Y2I6 AP000347.1-202ENST00000435868 847 ntBASIC25.63■■□□□ 1.69
NINLQ9Y2I6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 AC004263.2-201ENST00000617183 678 ntBASIC25.63■■□□□ 1.69
NINLQ9Y2I6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms