Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC3AQ9Y2H6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 AC091390.4-202ENST00000476426 537 ntBASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 Z85996.1-201ENST00000494644 937 ntBASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 AL138966.2-201ENST00000621997 464 ntBASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 MYC-208ENST00000641036 567 ntBASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 AC116562.4-202ENST00000641738 218 ntBASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC3AQ9Y2H6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 RNF152P1-201ENST00000397754 604 ntBASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 AC004951.3-201ENST00000418645 1148 ntBASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 AC096733.2-201ENST00000609937 1394 ntBASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FNDC3AQ9Y2H6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 AL031133.1-201ENST00000406807 723 ntBASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 FAM207BP-201ENST00000447172 505 ntBASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FNDC3AQ9Y2H6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC3AQ9Y2H6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC3AQ9Y2H6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.15■□□□□ 0.66
FNDC3AQ9Y2H6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.15■□□□□ 0.66
FNDC3AQ9Y2H6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.15■□□□□ 0.66
FNDC3AQ9Y2H6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FNDC3AQ9Y2H6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FNDC3AQ9Y2H6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms