Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 POU5F1P3-201ENST00000428824 1078 ntBASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 KRT18P16-201ENST00000510337 1294 ntBASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 AL023875.1-201ENST00000640777 796 ntBASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 AC093525.10-201ENST00000625130 1569 ntBASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.73□□□□□ -0.21
HHLA3Q9XRX5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 AC239809.2-201ENST00000415381 517 ntBASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.72□□□□□ -0.21
HHLA3Q9XRX5 AC073648.6-201ENST00000641589 218 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms