Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 PVRIG2P-201ENST00000435460 978 ntBASIC24.53■■□□□ 1.52
SPG7Q9UQ90 LINC00265-3P-201ENST00000447588 903 ntBASIC24.53■■□□□ 1.52
SPG7Q9UQ90 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 TSPY19P-201ENST00000418461 509 ntBASIC24.52■■□□□ 1.52
SPG7Q9UQ90 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 TSPY18P-201ENST00000441642 509 ntBASIC24.52■■□□□ 1.52
SPG7Q9UQ90 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 KRT17P6-201ENST00000453795 1220 ntBASIC24.52■■□□□ 1.52
SPG7Q9UQ90 AP000867.3-201ENST00000524675 377 ntBASIC24.52■■□□□ 1.52
SPG7Q9UQ90 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.52■■□□□ 1.52
SPG7Q9UQ90 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 AC034236.2-201ENST00000606662 1610 ntBASIC24.51■■□□□ 1.51
SPG7Q9UQ90 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 AP003733.1-201ENST00000491725 852 ntBASIC24.51■■□□□ 1.51
SPG7Q9UQ90 MIR3180-4-201ENST00000582223 153 ntBASIC24.51■■□□□ 1.51
SPG7Q9UQ90 AC005332.3-201ENST00000589904 676 ntBASIC24.51■■□□□ 1.51
SPG7Q9UQ90 IFNL4P1-201ENST00000607083 540 ntBASIC24.51■■□□□ 1.51
SPG7Q9UQ90 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.51■■□□□ 1.51
SPG7Q9UQ90 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SPG7Q9UQ90 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 IRX1P1-201ENST00000438849 1838 ntBASIC24.5■■□□□ 1.51
SPG7Q9UQ90 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 TOB2P1-201ENST00000469761 992 ntBASIC24.5■■□□□ 1.51
SPG7Q9UQ90 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 AC012615.1-201ENST00000565797 1299 ntBASIC24.5■■□□□ 1.51
SPG7Q9UQ90 AC090616.6-201ENST00000582640 721 ntBASIC24.5■■□□□ 1.51
SPG7Q9UQ90 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 AC125437.2-201ENST00000625180 2167 ntBASIC24.5■■□□□ 1.51
SPG7Q9UQ90 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 PCDHAC2-203ENST00000615316 3011 ntBASIC24.5■■□□□ 1.51
SPG7Q9UQ90 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG7Q9UQ90 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
SPG7Q9UQ90 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms