Protein–RNA interactions for Protein: Q9UHI6

DDX20, Probable ATP-dependent RNA helicase DDX20, humanhuman

Known RBP Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20Q9UHI6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX20Q9UHI6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 AL391807.1-203ENST00000604392 2365 ntBASIC21.22■□□□□ 0.99
DDX20Q9UHI6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 MCCD1P1-208ENST00000445732 328 ntBASIC21.22■□□□□ 0.99
DDX20Q9UHI6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 LINC01711-201ENST00000598340 967 ntBASIC21.22■□□□□ 0.99
DDX20Q9UHI6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX20Q9UHI6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 FOSL1P1-201ENST00000511041 816 ntBASIC21.21■□□□□ 0.99
DDX20Q9UHI6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX20Q9UHI6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
DDX20Q9UHI6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 RNF126P1-202ENST00000569893 925 ntBASIC21.2■□□□□ 0.98
DDX20Q9UHI6 MIR3917-201ENST00000580971 93 ntBASIC21.2■□□□□ 0.98
DDX20Q9UHI6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 AC112497.1-201ENST00000624824 639 ntBASIC21.2■□□□□ 0.98
DDX20Q9UHI6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX20Q9UHI6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 ZNF815P-204ENST00000434898 1737 ntBASIC21.19■□□□□ 0.98
DDX20Q9UHI6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 TOB2P1-201ENST00000469761 992 ntBASIC21.19■□□□□ 0.98
DDX20Q9UHI6 KRT18P31-201ENST00000506277 1292 ntBASIC21.19■□□□□ 0.98
DDX20Q9UHI6 AC012615.1-201ENST00000565797 1299 ntBASIC21.19■□□□□ 0.98
DDX20Q9UHI6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX20Q9UHI6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX20Q9UHI6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX20Q9UHI6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX20Q9UHI6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX20Q9UHI6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX20Q9UHI6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX20Q9UHI6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX20Q9UHI6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms