Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 HOXB1-202ENST00000577092 1414 ntBASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 AC011840.4-201ENST00000578471 627 ntBASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.78■■□□□ 1.4
TFCP2L1Q9NZI6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 AC055717.3-201ENST00000622967 595 ntBASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
TFCP2L1Q9NZI6 AL109659.2-201ENST00000606809 1674 ntBASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 AC008556.1-201ENST00000610908 2040 ntBASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 MIR564-202ENST00000385049 94 ntBASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 MIR5100-201ENST00000579544 119 ntBASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 MIR7706-201ENST00000613747 67 ntBASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.76■■□□□ 1.39
TFCP2L1Q9NZI6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 AC008608.2-201ENST00000606089 416 ntBASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TFCP2L1Q9NZI6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TFCP2L1Q9NZI6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TFCP2L1Q9NZI6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TFCP2L1Q9NZI6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TFCP2L1Q9NZI6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TFCP2L1Q9NZI6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TFCP2L1Q9NZI6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms