Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 AC113347.1-201ENST00000413321 391 ntBASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.74■□□□□ 0.43
PRDM9Q9NQV7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 AL512604.3-201ENST00000569583 964 ntBASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PRDM9Q9NQV7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 LIN28AP1-201ENST00000429574 405 ntBASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 AL137013.1-201ENST00000432946 1228 ntBASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 AC008622.2-201ENST00000617006 1229 ntBASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM9Q9NQV7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms