Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 DUX4L16-201ENST00000555130 1264 ntBASIC17.08■□□□□ 0.32
HMG20AQ9NP66 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 CNN2P6-201ENST00000439038 900 ntBASIC17.07■□□□□ 0.32
HMG20AQ9NP66 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 AC011767.1-201ENST00000617410 1153 ntBASIC17.07■□□□□ 0.32
HMG20AQ9NP66 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMG20AQ9NP66 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 RARRES2P4-201ENST00000514074 484 ntBASIC17.06■□□□□ 0.32
HMG20AQ9NP66 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 MIR5787-201ENST00000611784 55 ntBASIC17.06■□□□□ 0.32
HMG20AQ9NP66 AC100791.3-201ENST00000617619 330 ntBASIC17.06■□□□□ 0.32
HMG20AQ9NP66 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.06■□□□□ 0.32
HMG20AQ9NP66 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMG20AQ9NP66 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 AC068338.2-201ENST00000563278 1430 ntBASIC17.05■□□□□ 0.32
HMG20AQ9NP66 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms