Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 AC016769.1-201ENST00000409132 1010 ntBASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ZNRF2P3-201ENST00000424200 374 ntBASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 AC010980.2-201ENST00000587099 1412 ntBASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SND1-IT1Q9HBX3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.58□□□□□ -0.39
SND1-IT1Q9HBX3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
SND1-IT1Q9HBX3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 OR10C1-204ENST00000622521 1039 ntBASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.58□□□□□ -0.4
SND1-IT1Q9HBX3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 KRT17P1-201ENST00000399211 1546 ntBASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SND1-IT1Q9HBX3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms