Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 AL390955.1-201ENST00000428694 934 ntBASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 AL353719.1-201ENST00000566847 864 ntBASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 MIR4674-201ENST00000582457 87 ntBASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 AC112777.1-201ENST00000540175 1423 ntBASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 AC104581.1-202ENST00000635932 2618 ntBASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.02■□□□□ 0.95
CCSER1Q9C0I3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCSER1Q9C0I3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 MIR564-202ENST00000385049 94 ntBASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 MIR1238-201ENST00000408483 83 ntBASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 MCCD1P1-208ENST00000445732 328 ntBASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 TSPY15P-201ENST00000457163 923 ntBASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCSER1Q9C0I3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 TSPY17P-201ENST00000450329 467 ntBASIC21■□□□□ 0.95
CCSER1Q9C0I3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 AC126763.1-201ENST00000552015 2118 ntBASIC21■□□□□ 0.95
CCSER1Q9C0I3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 MYC-208ENST00000641036 567 ntBASIC21■□□□□ 0.95
CCSER1Q9C0I3 AC092338.2-201ENST00000568827 1415 ntBASIC21■□□□□ 0.95
CCSER1Q9C0I3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCSER1Q9C0I3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCSER1Q9C0I3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCSER1Q9C0I3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms