Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 MIR574-201ENST00000385209 96 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 IGHGP-201ENST00000390555 1178 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 AL590627.1-203ENST00000421194 1026 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 MOK-208ENST00000519058 917 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC090616.6-201ENST00000582640 721 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 GPR32P1-201ENST00000601788 811 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 BX640515.1-201ENST00000617215 977 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 REXO1L6P-202ENST00000619970 1078 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC139530.3-201ENST00000620344 690 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 KRT8P32-201ENST00000512863 1461 ntBASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 NUS1P2-201ENST00000417358 873 ntBASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 AL662844.1-201ENST00000546340 181 ntBASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 IL9RP2-201ENST00000423948 1312 ntBASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-1Q9BYQ7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-1Q9BYQ7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms