Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC126763.1-201ENST00000552015 2118 ntBASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 AL589743.5-201ENST00000616611 1050 ntBASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 AL139384.1-201ENST00000612143 3047 ntBASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP4Q9BWG4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 TFP1-202ENST00000475455 1573 ntBASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 CNN2P6-201ENST00000439038 900 ntBASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP4Q9BWG4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 CROCCP1-201ENST00000426910 5675 ntBASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP4Q9BWG4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms