Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.83■■□□□ 1.09
SDF4Q9BRK5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SDF4Q9BRK5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SDF4Q9BRK5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SDF4Q9BRK5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.83■■□□□ 1.08
SDF4Q9BRK5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.83■■□□□ 1.08
SDF4Q9BRK5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.83■■□□□ 1.08
SDF4Q9BRK5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SDF4Q9BRK5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SDF4Q9BRK5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 KRT8P9-201ENST00000558927 1449 ntBASIC21.82■■□□□ 1.08
SDF4Q9BRK5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.82■■□□□ 1.08
SDF4Q9BRK5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 Z85996.1-201ENST00000494644 937 ntBASIC21.82■■□□□ 1.08
SDF4Q9BRK5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 AC097493.4-201ENST00000641197 219 ntBASIC21.82■■□□□ 1.08
SDF4Q9BRK5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 SDHAP1-207ENST00000440850 2000 ntBASIC21.82■■□□□ 1.08
SDF4Q9BRK5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.82■■□□□ 1.08
SDF4Q9BRK5 AC104417.2-201ENST00000562989 1793 ntBASIC21.82■■□□□ 1.08
SDF4Q9BRK5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 AC097488.1-201ENST00000507834 756 ntBASIC21.81■■□□□ 1.08
SDF4Q9BRK5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF4Q9BRK5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 FAM207BP-201ENST00000447172 505 ntBASIC21.8■■□□□ 1.08
SDF4Q9BRK5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 NAPSB-206ENST00000562112 1266 ntBASIC21.8■■□□□ 1.08
SDF4Q9BRK5 AP000692.2-201ENST00000608391 879 ntBASIC21.8■■□□□ 1.08
SDF4Q9BRK5 AC012306.2-201ENST00000609350 630 ntBASIC21.8■■□□□ 1.08
SDF4Q9BRK5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF4Q9BRK5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 CRYGFP-201ENST00000418459 633 ntBASIC21.79■■□□□ 1.08
SDF4Q9BRK5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 AC008040.2-201ENST00000461049 708 ntBASIC21.79■■□□□ 1.08
SDF4Q9BRK5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 SLC25A1P4-201ENST00000567977 778 ntBASIC21.79■■□□□ 1.08
SDF4Q9BRK5 AP005242.2-201ENST00000580065 1175 ntBASIC21.79■■□□□ 1.08
SDF4Q9BRK5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 AC104581.1-202ENST00000635932 2618 ntBASIC21.79■■□□□ 1.08
SDF4Q9BRK5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SDF4Q9BRK5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.78■■□□□ 1.08
SDF4Q9BRK5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms