Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AP001005.1-201ENST00000571755 1248 ntBASIC20.05■□□□□ 0.8
RAD9AQ99638 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD9AQ99638 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.05■□□□□ 0.8
RAD9AQ99638 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD9AQ99638 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD9AQ99638 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAD9AQ99638 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.05■□□□□ 0.8
RAD9AQ99638 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RAD9AQ99638 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD9AQ99638 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 IL9RP2-201ENST00000423948 1312 ntBASIC20.04■□□□□ 0.8
RAD9AQ99638 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RAD9AQ99638 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.04■□□□□ 0.8
RAD9AQ99638 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.04■□□□□ 0.8
RAD9AQ99638 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.04■□□□□ 0.8
RAD9AQ99638 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.04■□□□□ 0.8
RAD9AQ99638 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.04■□□□□ 0.8
RAD9AQ99638 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAD9AQ99638 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAD9AQ99638 GABARAPL3-202ENST00000624044 1851 ntBASIC20.03■□□□□ 0.8
RAD9AQ99638 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RAD9AQ99638 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD9AQ99638 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.03■□□□□ 0.8
RAD9AQ99638 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD9AQ99638 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD9AQ99638 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAD9AQ99638 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAD9AQ99638 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAD9AQ99638 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.03■□□□□ 0.8
RAD9AQ99638 RNA5SP419-201ENST00000515908 135 ntBASIC20.03■□□□□ 0.8
RAD9AQ99638 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RAD9AQ99638 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RAD9AQ99638 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.03■□□□□ 0.8
RAD9AQ99638 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
RAD9AQ99638 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.03■□□□□ 0.8
RAD9AQ99638 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD9AQ99638 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAD9AQ99638 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAD9AQ99638 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAD9AQ99638 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD9AQ99638 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD9AQ99638 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.02■□□□□ 0.8
RAD9AQ99638 AC099778.1-201ENST00000568593 1911 ntBASIC20.02■□□□□ 0.8
RAD9AQ99638 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD9AQ99638 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD9AQ99638 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.02■□□□□ 0.8
RAD9AQ99638 NUS1P2-201ENST00000417358 873 ntBASIC20.02■□□□□ 0.8
RAD9AQ99638 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.02■□□□□ 0.8
RAD9AQ99638 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.02■□□□□ 0.8
RAD9AQ99638 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.02■□□□□ 0.8
RAD9AQ99638 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.02■□□□□ 0.8
RAD9AQ99638 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.02■□□□□ 0.8
RAD9AQ99638 AC024563.2-201ENST00000603282 481 ntBASIC20.02■□□□□ 0.8
RAD9AQ99638 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.02■□□□□ 0.8
RAD9AQ99638 AL773604.1-201ENST00000617417 272 ntBASIC20.02■□□□□ 0.8
RAD9AQ99638 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD9AQ99638 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
RAD9AQ99638 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAD9AQ99638 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.01■□□□□ 0.79
RAD9AQ99638 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.01■□□□□ 0.79
RAD9AQ99638 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.01■□□□□ 0.79
RAD9AQ99638 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.01■□□□□ 0.79
RAD9AQ99638 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAD9AQ99638 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RAD9AQ99638 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAD9AQ99638 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD9AQ99638 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD9AQ99638 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD9AQ99638 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20■□□□□ 0.79
RAD9AQ99638 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAD9AQ99638 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAD9AQ99638 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD9AQ99638 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAD9AQ99638 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RAD9AQ99638 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD9AQ99638 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20■□□□□ 0.79
RAD9AQ99638 POM121L3P-201ENST00000419331 1163 ntBASIC20■□□□□ 0.79
RAD9AQ99638 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20■□□□□ 0.79
RAD9AQ99638 FAM197Y8-203ENST00000450145 560 ntBASIC20■□□□□ 0.79
RAD9AQ99638 MINOS1P3-201ENST00000457048 203 ntBASIC20■□□□□ 0.79
RAD9AQ99638 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms