Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNA5SP419-201ENST00000515908 135 ntBASIC19.54■□□□□ 0.72
CDCA3Q99618 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDCA3Q99618 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.54■□□□□ 0.72
CDCA3Q99618 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.54■□□□□ 0.72
CDCA3Q99618 AC006333.2-201ENST00000607957 2099 ntBASIC19.54■□□□□ 0.72
CDCA3Q99618 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA3Q99618 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA3Q99618 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.54■□□□□ 0.72
CDCA3Q99618 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CDCA3Q99618 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA3Q99618 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDCA3Q99618 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA3Q99618 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.53■□□□□ 0.72
CDCA3Q99618 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.53■□□□□ 0.72
CDCA3Q99618 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA3Q99618 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.53■□□□□ 0.72
CDCA3Q99618 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.53■□□□□ 0.72
CDCA3Q99618 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.53■□□□□ 0.72
CDCA3Q99618 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDCA3Q99618 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDCA3Q99618 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.53■□□□□ 0.72
CDCA3Q99618 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.53■□□□□ 0.72
CDCA3Q99618 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.53■□□□□ 0.72
CDCA3Q99618 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.53■□□□□ 0.72
CDCA3Q99618 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.53■□□□□ 0.72
CDCA3Q99618 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDCA3Q99618 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA3Q99618 TP73-AS1-207ENST00000624167 988 ntBASIC19.53■□□□□ 0.72
CDCA3Q99618 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA3Q99618 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA3Q99618 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.53■□□□□ 0.72
CDCA3Q99618 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 FAM197Y8-203ENST00000450145 560 ntBASIC19.52■□□□□ 0.72
CDCA3Q99618 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.52■□□□□ 0.72
CDCA3Q99618 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.52■□□□□ 0.72
CDCA3Q99618 AP005901.3-202ENST00000581653 237 ntBASIC19.52■□□□□ 0.72
CDCA3Q99618 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.52■□□□□ 0.72
CDCA3Q99618 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA3Q99618 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.52■□□□□ 0.71
CDCA3Q99618 TEX21P-204ENST00000641479 1693 ntBASIC19.52■□□□□ 0.71
CDCA3Q99618 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDCA3Q99618 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDCA3Q99618 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDCA3Q99618 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDCA3Q99618 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA3Q99618 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.51■□□□□ 0.71
CDCA3Q99618 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA3Q99618 KRT18P67-201ENST00000432816 1264 ntBASIC19.51■□□□□ 0.71
CDCA3Q99618 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.51■□□□□ 0.71
CDCA3Q99618 AF186996.4-201ENST00000467186 377 ntBASIC19.51■□□□□ 0.71
CDCA3Q99618 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA3Q99618 AC093909.1-201ENST00000504731 1122 ntBASIC19.51■□□□□ 0.71
CDCA3Q99618 KRT18P58-201ENST00000527480 1120 ntBASIC19.51■□□□□ 0.71
CDCA3Q99618 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA3Q99618 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA3Q99618 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.51■□□□□ 0.71
CDCA3Q99618 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA3Q99618 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDCA3Q99618 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDCA3Q99618 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.5■□□□□ 0.71
CDCA3Q99618 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA3Q99618 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA3Q99618 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA3Q99618 AL591684.3-201ENST00000605187 298 ntBASIC19.5■□□□□ 0.71
CDCA3Q99618 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.5■□□□□ 0.71
CDCA3Q99618 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CDCA3Q99618 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDCA3Q99618 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA3Q99618 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CDCA3Q99618 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.49■□□□□ 0.71
CDCA3Q99618 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDCA3Q99618 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.49■□□□□ 0.71
CDCA3Q99618 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.49■□□□□ 0.71
CDCA3Q99618 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 AL031284.1-201ENST00000419297 478 ntBASIC19.49■□□□□ 0.71
CDCA3Q99618 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms