Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SPENQ96T58 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPENQ96T58 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.93■□□□□ 0.3
SPENQ96T58 AC079776.4-201ENST00000511039 504 ntBASIC16.93■□□□□ 0.3
SPENQ96T58 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.93■□□□□ 0.3
SPENQ96T58 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SPENQ96T58 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.93■□□□□ 0.3
SPENQ96T58 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPENQ96T58 AL023284.2-201ENST00000405850 579 ntBASIC16.93■□□□□ 0.3
SPENQ96T58 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.93■□□□□ 0.3
SPENQ96T58 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.93■□□□□ 0.3
SPENQ96T58 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SPENQ96T58 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPENQ96T58 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.93■□□□□ 0.3
SPENQ96T58 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SPENQ96T58 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SPENQ96T58 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPENQ96T58 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPENQ96T58 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.92■□□□□ 0.3
SPENQ96T58 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.92■□□□□ 0.3
SPENQ96T58 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.92■□□□□ 0.3
SPENQ96T58 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.92■□□□□ 0.3
SPENQ96T58 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPENQ96T58 TEX21P-204ENST00000641479 1693 ntBASIC16.92■□□□□ 0.3
SPENQ96T58 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPENQ96T58 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPENQ96T58 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPENQ96T58 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPENQ96T58 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.92■□□□□ 0.3
SPENQ96T58 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.92■□□□□ 0.3
SPENQ96T58 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.92■□□□□ 0.3
SPENQ96T58 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SPENQ96T58 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.91■□□□□ 0.3
SPENQ96T58 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.91■□□□□ 0.3
SPENQ96T58 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SPENQ96T58 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.91■□□□□ 0.3
SPENQ96T58 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SPENQ96T58 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.91■□□□□ 0.3
SPENQ96T58 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.91■□□□□ 0.3
SPENQ96T58 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.91■□□□□ 0.3
SPENQ96T58 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.91■□□□□ 0.3
SPENQ96T58 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.91■□□□□ 0.3
SPENQ96T58 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.91■□□□□ 0.3
SPENQ96T58 PGAM5P1-201ENST00000518923 814 ntBASIC16.91■□□□□ 0.3
SPENQ96T58 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPENQ96T58 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPENQ96T58 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.9■□□□□ 0.3
SPENQ96T58 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.9■□□□□ 0.3
SPENQ96T58 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SPENQ96T58 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPENQ96T58 IGHV3-47-201ENST00000425060 335 ntBASIC16.9■□□□□ 0.3
SPENQ96T58 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.9■□□□□ 0.3
SPENQ96T58 AL136038.4-201ENST00000603606 1261 ntBASIC16.9■□□□□ 0.3
SPENQ96T58 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms