Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 Z82202.1-201ENST00000623446 1880 ntBASIC16.53■□□□□ 0.24
PCNX1Q96RV3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 KRT8P3-201ENST00000519669 1449 ntBASIC16.53■□□□□ 0.24
PCNX1Q96RV3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 AC125437.2-201ENST00000625180 2167 ntBASIC16.53■□□□□ 0.24
PCNX1Q96RV3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 MCCD1P1-208ENST00000445732 328 ntBASIC16.53■□□□□ 0.24
PCNX1Q96RV3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 AC112497.1-201ENST00000624824 639 ntBASIC16.53■□□□□ 0.24
PCNX1Q96RV3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 HOXB1-202ENST00000577092 1414 ntBASIC16.53■□□□□ 0.24
PCNX1Q96RV3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNX1Q96RV3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 TSSC2-201ENST00000450217 709 ntBASIC16.52■□□□□ 0.24
PCNX1Q96RV3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 AC079602.3-201ENST00000623931 403 ntBASIC16.52■□□□□ 0.24
PCNX1Q96RV3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCNX1Q96RV3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 AC104819.1-201ENST00000504587 486 ntBASIC16.52■□□□□ 0.23
PCNX1Q96RV3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 AC233702.3-201ENST00000578656 1387 ntBASIC16.52■□□□□ 0.23
PCNX1Q96RV3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.52■□□□□ 0.23
PCNX1Q96RV3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 RNA5SP419-201ENST00000515908 135 ntBASIC16.51■□□□□ 0.23
PCNX1Q96RV3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 LINC02084-201ENST00000606069 1096 ntBASIC16.51■□□□□ 0.23
PCNX1Q96RV3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.51■□□□□ 0.23
PCNX1Q96RV3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 Z83836.1-201ENST00000624605 1642 ntBASIC16.51■□□□□ 0.23
PCNX1Q96RV3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 AC091607.1-201ENST00000490318 1060 ntBASIC16.51■□□□□ 0.23
PCNX1Q96RV3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.51■□□□□ 0.23
PCNX1Q96RV3 AL662844.1-201ENST00000546340 181 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms