Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 AC138028.4-201ENST00000564984 1845 ntBASIC17.71■□□□□ 0.43
NR1H4Q96RI1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NR1H4Q96RI1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
NR1H4Q96RI1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NR1H4Q96RI1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.71■□□□□ 0.42
NR1H4Q96RI1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NR1H4Q96RI1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.7■□□□□ 0.42
NR1H4Q96RI1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 KRT8P20-201ENST00000423953 1409 ntBASIC17.7■□□□□ 0.42
NR1H4Q96RI1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H4Q96RI1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 AL031432.3-201ENST00000607698 485 ntBASIC17.69■□□□□ 0.42
NR1H4Q96RI1 AL356652.1-201ENST00000615962 565 ntBASIC17.69■□□□□ 0.42
NR1H4Q96RI1 AC120498.10-201ENST00000621827 505 ntBASIC17.69■□□□□ 0.42
NR1H4Q96RI1 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.69■□□□□ 0.42
NR1H4Q96RI1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.69■□□□□ 0.42
NR1H4Q96RI1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H4Q96RI1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms