Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 NSUN5P1-202ENST00000421140 1535 ntBASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 NSUN5P2-203ENST00000457352 1529 ntBASIC15.99■□□□□ 0.15
CSMD1Q96PZ7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 AC034105.1-201ENST00000563488 319 ntBASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 AC099336.1-202ENST00000602961 463 ntBASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD1Q96PZ7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 MIR3687-2-201ENST00000577708 61 ntBASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 MIR3687-1-201ENST00000614492 61 ntBASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 AC233702.3-201ENST00000578656 1387 ntBASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD1Q96PZ7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD1Q96PZ7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.96■□□□□ 0.14
CSMD1Q96PZ7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms