Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF48Q96MX3 AL121894.2-201ENST00000602977 491 ntBASIC15.27■□□□□ 0.04
ZNF48Q96MX3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF48Q96MX3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 LINC01311-201ENST00000565162 1445 ntBASIC15.26■□□□□ 0.03
ZNF48Q96MX3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 KRT18P48-201ENST00000434763 852 ntBASIC15.26■□□□□ 0.03
ZNF48Q96MX3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF48Q96MX3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 TSPY21P-201ENST00000433481 731 ntBASIC15.25■□□□□ 0.03
ZNF48Q96MX3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 KRT126P-201ENST00000549467 1181 ntBASIC15.25■□□□□ 0.03
ZNF48Q96MX3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 AC069148.1-201ENST00000608741 768 ntBASIC15.25■□□□□ 0.03
ZNF48Q96MX3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF48Q96MX3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms