Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 KRT18P61-201ENST00000585825 1298 ntBASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 AC005837.3-201ENST00000612163 286 ntBASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 AC013268.1-206ENST00000638368 961 ntBASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 AC112229.1-201ENST00000639295 961 ntBASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM2Q96JY6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.77■□□□□ 0.91
PDLIM2Q96JY6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.77■□□□□ 0.91
PDLIM2Q96JY6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDLIM2Q96JY6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.77■□□□□ 0.91
PDLIM2Q96JY6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 AL023806.1-201ENST00000603994 1649 ntBASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 TSPY21P-201ENST00000433481 731 ntBASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 AC068587.9-201ENST00000641814 219 ntBASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM2Q96JY6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 RCC2P6-201ENST00000526625 1557 ntBASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM2Q96JY6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 KRT8P45-201ENST00000414328 1447 ntBASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 AL355472.2-201ENST00000422958 438 ntBASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 AC123595.1-201ENST00000440769 1046 ntBASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 SUDS3P1-201ENST00000505831 966 ntBASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PDLIM2Q96JY6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms